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ASM1341779v1

Organism name:
Acinetobacter sp. YH12224 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: YH12224
BioSample:
SAMN12492929
BioProject:
PRJNA558522
Submitter:
South China Agricultural University
Date:
2020/07/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_013417795.1 (latest)
RefSeq assembly accession:
GCF_013417795.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
VPDF01
Assembly method:
SPAdes v. 3.12.0
Expected final version:
no
Genome coverage:
0.83681079x
Sequencing technology:
Illumina HiSeq

IDs: 7360101 [UID] 20375528 [GenBank] 20382618 [RefSeq]

See Genome Information for Acinetobacter sp. YH12224

History (Show revision history)

Comment

Global statistics

Total sequence length3,114,651
Total ungapped length3,114,651
Number of contigs68
Contig N50127,657
Contig L508
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)68

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,114,651683,114,651127,65700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter sp. YH12224Acinetobacter sp. YH12224

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000488255.1Acinetobacter indicustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type97.7883.1480.66

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna