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Rhpom_1.0

Organism name:
Rhagoletis pomonella (apple maggot)
Isolate:
Grant_MI
Sex:
pooled male and female
BioSample:
SAMN05388941
BioProject:
PRJNA328976
Submitter:
University of Illinois at Urbana-Champaign
Date:
2020/06/18
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_013731165.1 (latest)
RefSeq assembly accession:
GCF_013731165.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JABWGP01
Assembly method:
SOAPdenovo v. July-2011
Expected final version:
no
Genome coverage:
20.0x
Sequencing technology:
Illumina HiSeq

IDs: 8102091 [UID] 22153178 [GenBank] 22433078 [RefSeq]

See Genome Information for Rhagoletis pomonella

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length1,223,288,327
Total ungapped length1,125,245,627
Gaps between scaffolds0
Number of scaffolds32,060
Scaffold N5072,319,622
Scaffold L507
Number of contigs114,121
Contig N5023,570
Contig L5012,704
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)114,121

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,223,288,32732,0601,125,245,62772,319,62282,0610