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Source database (GenBank or RefSeq) File type

ASM1435652v1

This assembly has been replaced. See current version

Organism name:

Nilaparvata lugens (brown planthopper)

Isolate:

BPH

BioSample:

SAMN13382557

BioProject:

PRJNA591478

Submitter:

Huazhong Agricultural University

Date:

2020/09/09

Assembly level:

Chromosome

Genome representation:

full

GenBank assembly accession:

GCA_014356525.1 (latest)

RefSeq assembly accession:

GCF_014356525.1 (replaced)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

WOVF01

Assembly method:

WTDBG v. 2.1; SmartDenovo v. 1.5; HiC-Pro v. 2.7.8

Expected final version:

yes

Genome coverage:

418x

Sequencing technology:

PacBio Sequel

IDs: 8045441 [UID] 22011118 [GenBank] 24761058 [RefSeq]

See Genome Information for Nilaparvata lugens

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_014356525.1	≠	GCF_014356525.2	ASM1435652v1	Chromosome	Latest GenBank, Latest RefSeq
GCA_014356525.1	≠	GCF_014356525.1	ASM1435652v1	Chromosome	Latest GenBank, Replaced RefSeq

Comment

Global statistics

Total sequence length	1,087,825,591
Total ungapped length	1,087,372,691
Gaps between scaffolds	0
Number of scaffolds	7,094
Scaffold N50	77,631,935
Scaffold L50	6
Number of contigs	11,623
Contig N50	583,858
Contig L50	412
Total number of chromosomes and plasmids	17
Number of component sequences (WGS or clone)	7,094

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM025305.1	=	NC_052504.1	0
Chromosome 2	CM025306.1	=	NC_052505.1	0
Chromosome 3	CM025307.1	=	NC_052506.1	0
Chromosome 4	CM025308.1	=	NC_052507.1	0
Chromosome 5	CM025309.1	=	NC_052508.1	0
Chromosome 6	CM025310.1	=	NC_052509.1	0
Chromosome 7	CM025311.1	=	NC_052510.1	0
Chromosome 8	CM025312.1	=	NC_052511.1	0
Chromosome 9	CM025313.1	=	NC_052512.1	0
Chromosome 10	CM025314.1	=	NC_052513.1	0
Chromosome 11	CM025315.1	=	NC_052514.1	0
Chromosome 12	CM025316.1	=	NC_052515.1	0
Chromosome 13	CM025317.1	=	NC_052516.1	0
Chromosome 14	CM025318.1	=	NC_052517.1	0
Chromosome X	CM025319.1	=	NC_052518.1	0
Chromosome Y	CM025320.1	=	NC_052519.1	0
unplaced	n/a	n/a	n/a	7,077

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	1,087,807,972	7,093	1,087,355,072	77,631,935	4,529
Chromosome 1	102,288,386	1	102,248,986	102,288,386	394
Chromosome 2	99,794,040	1	99,749,540	99,794,040	445
Chromosome 3	99,124,764	1	99,092,264	99,124,764	325
Chromosome 4	80,435,752	1	80,406,852	80,435,752	289
Chromosome 5	77,631,935	1	77,603,135	77,631,935	288
Chromosome 6	68,809,661	1	68,783,461	68,809,661	262
Chromosome 7	65,058,112	1	65,032,212	65,058,112	259
Chromosome 8	52,941,447	1	52,917,647	52,941,447	238
Chromosome 9	46,099,291	1	46,059,691	46,099,291	396
Chromosome 10	46,470,548	1	46,450,448	46,470,548	201
Chromosome 11	45,945,927	1	45,921,427	45,945,927	245
Chromosome 12	35,667,315	1	35,644,815	35,667,315	225
Chromosome 13	31,814,171	1	31,795,471	31,814,171	187
Chromosome 14	23,179,391	1	23,158,391	23,179,391	210
Chromosome X	105,749,445	1	105,708,145	105,749,445	413
Chromosome Y	10,052,300	1	10,037,100	10,052,300	152
unplaced	96,745,487	7,077	96,745,487	17,388	0

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ASM1435652v1

See Genome Information for Nilaparvata lugens

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Unit Name
Primary Assembly
non-nuclear