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ASM1482585v1

Organism name:
Bombus pyrosoma (bees)
Isolate:
SC7728
BioSample:
SAMN15897728
BioProject:
PRJNA659133
Submitter:
Chinese Academy of Agricultural Sciences
Date:
2020/10/02
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_014825855.1 (latest)
RefSeq assembly accession:
GCF_014825855.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JACXIN01
Assembly method:
DISCOVAR de novo v. 52488
Expected final version:
yes
Genome coverage:
100x
Sequencing technology:
Illumina HiSeq

IDs: 8220611 [UID] 22448448 [GenBank] 28903948 [RefSeq]

See Genome Information for Bombus pyrosoma

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length254,804,690
Total ungapped length251,769,399
Gaps between scaffolds0
Number of scaffolds4,727
Scaffold N5015,222,711
Scaffold L508
Number of contigs9,683
Contig N50781,044
Contig L5089
Total number of chromosomes and plasmids18
Number of component sequences (WGS or clone)4,727

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Assembly Information

Related Information

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_014825995.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Linkage Group LG1CM026125.1=NC_057770.10
Linkage Group LG2CM026126.1=NC_057771.10
Linkage Group LG3CM026127.1=NC_057772.10
Linkage Group LG4CM026128.1=NC_057773.10
Linkage Group LG5CM026129.1=NC_057774.10
Linkage Group LG6CM026130.1=NC_057775.10
Linkage Group LG7CM026131.1=NC_057776.10
Linkage Group LG8CM026132.1=NC_057777.10
Linkage Group LG9CM026133.1=NC_057778.10
Linkage Group LG10CM026134.1=NC_057779.10
Linkage Group LG11CM026135.1=NC_057780.10
Linkage Group LG12CM026136.1=NC_057781.10
Linkage Group LG13CM026137.1=NC_057782.10
Linkage Group LG14CM026138.1=NC_057783.10
Linkage Group LG15CM026139.1=NC_057784.10
Linkage Group LG16CM026140.1=NC_057785.10
Linkage Group LG17CM026141.1=NC_057786.10
Linkage Group LG18CM026142.1=NC_057787.10
unplacedn/an/an/a4,709

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All254,804,6904,727251,769,39915,222,7114,9560
Linkage Group LG115,858,836115,793,97215,858,836880
Linkage Group LG215,455,352115,425,25815,455,352520
Linkage Group LG316,632,745116,563,76316,632,745820
Linkage Group LG414,812,177114,781,45314,812,177300
Linkage Group LG511,768,334111,728,80311,768,334350
Linkage Group LG617,974,101117,890,31017,974,101760
Linkage Group LG719,821,024119,761,31719,821,024830
Linkage Group LG812,128,079111,960,42012,128,0792150
Linkage Group LG915,222,711115,193,42915,222,711420
Linkage Group LG1017,739,640117,433,59717,739,6404610
Linkage Group LG1116,587,237116,531,48516,587,237710
Linkage Group LG1212,696,624112,677,63612,696,624220
Linkage Group LG1311,321,061111,246,92711,321,061680
Linkage Group LG1411,434,536111,375,01211,434,536690
Linkage Group LG1511,263,091111,228,97611,263,091450
Linkage Group LG168,176,60518,086,4908,176,605720
Linkage Group LG175,881,31115,698,8235,881,3113090
Linkage Group LG183,531,00713,474,8123,531,007640
unplaced16,500,2194,70914,916,916305,1613,0720