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Source database (GenBank or RefSeq) File type

ASM1485885v1

Organism name:

Bufo gargarizans (Asiatic toad)

Isolate:

SCDJY-AF-19

Sex:

female

BioSample:

SAMN14734018

BioProject:

PRJNA628553

Submitter:

Chengdu Institute of Biology, CAS

Date:

2020/10/21

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_014858855.1 (latest)

RefSeq assembly accession:

GCF_014858855.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

JABFFT01

Assembly method:

FALCON v. April-2019

Expected final version:

yes

Genome coverage:

103.0x

Sequencing technology:

PacBio Sequel

IDs: 8254931 [UID] 22543538 [GenBank] 29370228 [RefSeq]

See Genome Information for Bufo gargarizans

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_014858855.1	≠	GCF_014858855.1	ASM1485885v1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	4,545,482,719
Total ungapped length	4,464,028,351
Gaps between scaffolds	0
Number of scaffolds	748
Scaffold N50	539,822,115
Scaffold L50	4
Number of contigs	4,621
Contig N50	1,738,317
Contig L50	749
Total number of chromosomes and plasmids	12
Number of component sequences (WGS or clone)	748

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM026465.1	=	NC_058080.1	0
Chromosome 2	CM026466.1	=	NC_058081.1	0
Chromosome 3	CM026467.1	=	NC_058082.1	0
Chromosome 4	CM026468.1	=	NC_058083.1	0
Chromosome 5	CM026469.1	=	NC_058084.1	0
Chromosome 6	CM026470.1	=	NC_058085.1	0
Chromosome 7	CM026471.1	=	NC_058086.1	0
Chromosome 8	CM026472.1	=	NC_058087.1	0
Chromosome 9	CM026473.1	=	NC_058088.1	0
Chromosome 10	CM026474.1	=	NC_058089.1	0
Chromosome 11	CM026475.1	=	NC_058090.1	0
unplaced	n/a	n/a	n/a	736

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	4,545,465,442	747	4,464,011,074	539,822,115	3,873
Chromosome 1	759,857,066	1	743,161,366	759,857,066	603
Chromosome 2	727,270,232	1	718,086,618	727,270,232	558
Chromosome 3	626,048,145	1	615,914,689	626,048,145	528
Chromosome 4	539,822,115	1	531,470,554	539,822,115	428
Chromosome 5	493,934,695	1	485,762,836	493,934,695	459
Chromosome 6	389,733,055	1	382,010,036	389,733,055	366
Chromosome 7	203,307,855	1	200,984,264	203,307,855	177
Chromosome 8	201,305,805	1	197,396,387	201,305,805	186
Chromosome 9	198,661,094	1	192,434,627	198,661,094	167
Chromosome 10	133,019,451	1	131,333,043	133,019,451	135
Chromosome 11	100,359,282	1	95,094,700	100,359,282	116
unplaced	172,146,647	736	170,361,954	322,006	150

Assembly

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ASM1485885v1

See Genome Information for Bufo gargarizans

Pathogen Detection Resources

History (Show revision history)

Comment

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Assembly Unit Name
Primary Assembly
non-nuclear