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PumYag

Organism name:
Puma yagouaroundi (jaguarundi)
Infraspecific name:
Ecotype: Mexico
Sex:
male
BioSample:
SAMN14930875
BioProject:
PRJNA633021
Submitter:
Felidae consortium
Date:
2020/10/20
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_014898765.1 (latest)
RefSeq assembly accession:
GCF_014898765.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JACEOH01
Assembly method:
Supernova v. 2.1.1
Expected final version:
yes
Genome coverage:
37.0x
Sequencing technology:
Illumina NovaSeq

IDs: 8252991 [UID] 22537418 [GenBank] 25795868 [RefSeq]

See Genome Information for Puma yagouaroundi

History (Show revision history)

Comment

Global statistics

Total sequence length2,473,139,798
Total ungapped length2,419,760,664
Gaps between scaffolds0
Number of scaffolds10,948
Scaffold N5049,273,425
Scaffold L5015
Number of contigs53,447
Contig N50100,211
Contig L507,154
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)10,948

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,473,123,09810,9472,419,743,96449,273,42542,4990
MoleculeTotal
Length
Mitochondrion MT16,700