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Vero_WHO_p1.0

Organism name:
Chlorocebus sabaeus (green monkey)
Infraspecific name:
Strain: WHO RCB 10-87
Sex:
female
BioSample:
SAMN15458746
BioProject:
PRJNA644395
Submitter:
Viral Vectors and Vaccines Bioprocessing Group, McGill University
Date:
2020/11/06
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_015252025.1 (latest)
RefSeq assembly accession:
GCF_015252025.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JACDXN01
Assembly method:
SuperNova v. 1.0
Expected final version:
no
Genome coverage:
75x
Sequencing technology:
Illumina HiSeq
Linked assembly:
GCA_015251995.1 (alternate pseudohaplotype of diploid)

IDs: 8431811 [UID] 22938248 [GenBank] 23415548 [RefSeq]

See Genome Information for Chlorocebus sabaeus

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,937,827,970
Total ungapped length2,930,550,240
Gaps between scaffolds0
Number of scaffolds6,872
Scaffold N5081,790,585
Scaffold L5012
Number of contigs15,291
Contig N50839,654
Contig L501,032
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)6,872

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,937,827,9706,8722,930,550,24081,790,5858,4190