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Pmin_3.0

Organism name:
Patiria miniata (bat star)
Isolate:
m_02_andy
Sex:
male
BioSample:
SAMN13694171
BioProject:
PRJNA597964
Submitter:
Carnegie Mellon University
Date:
2020/12/01
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_015706575.1 (latest)
RefSeq assembly accession:
GCF_015706575.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JADOBP01
Assembly method:
Canu v. DEC-2019; 3D-DNA v. 180922
Expected final version:
yes
Genome coverage:
150.0x
Sequencing technology:
PacBio Sequel

IDs: 8659631 [UID] 23479448 [GenBank] 23626818 [RefSeq]

See Genome Information for Patiria miniata

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

The PacBio Sequel data was used in conjunction with HiC data generated from offspring embryos of a different animal from PRJNA597964 to produce this draft genome assembly

Global statistics

Total sequence length608,344,308
Total ungapped length607,763,808
Gaps between scaffolds0
Number of scaffolds30
Scaffold N5023,093,800
Scaffold L509
Number of contigs1,191
Contig N502,102,889
Contig L5087
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)30

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced608,344,30830607,763,80823,093,8001,1610