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Source database (GenBank or RefSeq) File type

ASM1680809v1

Organism name:

Vigna angularis (adzuki bean)

Infraspecific name:

Cultivar: LongXiaoDou No.4

BioSample:

SAMN14776547

BioProject:

PRJNA629451

Submitter:

Heilongjiang Academy of Agricultural Sciences

Date:

2021/02/04

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_016808095.1 (latest)

RefSeq assembly accession:

GCF_016808095.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosomes MT and Pltd

Data displayed for RefSeq version

WGS Project:

JABFOF01

Assembly method:

Canu v. 1.8

Expected final version:

yes

Genome coverage:

193.34x

Sequencing technology:

PacBio Sequel

IDs: 9220851 [UID] 24837438 [GenBank] 38403568 [RefSeq]

See Genome Information for Vigna angularis

Pathogen Detection Resources

There are 5 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_016808095.1	≠	GCF_016808095.1	ASM1680809v1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	448,362,642
Total ungapped length	448,359,442
Gaps between scaffolds	0
Number of scaffolds	36
Scaffold N50	41,033,850
Scaffold L50	5
Number of contigs	68
Contig N50	16,516,761
Contig L50	10
Total number of chromosomes and plasmids	13
Number of component sequences (WGS or clone)	36

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM028985.1	=	NC_068970.1	0
Chromosome 2	CM028986.1	=	NC_068971.1	0
Chromosome 3	CM028987.1	=	NC_068972.1	0
Chromosome 4	CM028988.1	=	NC_068973.1	0
Chromosome 5	CM028989.1	=	NC_068974.1	0
Chromosome 6	CM028990.1	=	NC_068975.1	0
Chromosome 7	CM028991.1	=	NC_068976.1	0
Chromosome 8	CM028992.1	=	NC_068977.1	0
Chromosome 9	CM028993.1	=	NC_068978.1	0
Chromosome 10	CM028994.1	=	NC_068979.1	0
Chromosome 11	CM028995.1	=	NC_068980.1	0
unplaced	n/a	n/a	n/a	23

Molecule name	GenBank ID		RefSeq ID
Mitochondrion MT	AP012599.1	=	NC_021092.1
Chloroplast Pltd	AP012598.1	=	NC_021091.1

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	447,806,493	34	447,803,293	41,033,850	32
Chromosome 1	65,407,200	1	65,407,000	65,407,200	2
Chromosome 2	52,846,339	1	52,846,139	52,846,339	2
Chromosome 3	42,681,439	1	42,680,939	42,681,439	5
Chromosome 4	42,641,100	1	42,641,000	42,641,100	1
Chromosome 5	41,033,850	1	41,033,550	41,033,850	3
Chromosome 6	38,121,061	1	38,120,961	38,121,061	1
Chromosome 7	37,163,307	1	37,163,007	37,163,307	3
Chromosome 8	36,286,043	1	36,285,543	36,286,043	5
Chromosome 9	32,215,300	1	32,215,000	32,215,300	3
Chromosome 10	31,493,818	1	31,493,318	31,493,818	5
Chromosome 11	27,654,650	1	27,654,450	27,654,650	2
unplaced	262,386	23	262,386	50,000	0

Molecule	Total Length
All	556,149
Mitochondrion MT	404,466
Chloroplast Pltd	151,683

Assembly

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ASM1680809v1

See Genome Information for Vigna angularis

Pathogen Detection Resources

There are 5 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Unit Name
Primary Assembly
non-nuclear