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Mior012

Organism name:
Microtus oregoni (creeping vole)
Isolate:
MIOR12
BioSample:
SAMN18478481
BioProject:
PRJNA505851
Submitter:
Oklahoma State Universtiy
Date:
2021/04/26
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_018167655.1 (latest)
RefSeq assembly accession:
GCF_018167655.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JAGKIF01
Assembly method:
HiFi Canu v. Sep-2020
Expected final version:
yes
Genome coverage:
43.0x
Sequencing technology:
PacBio Sequel; Oxford Nanopore PromethION

IDs: 9938851 [UID] 26498668 [GenBank] 26693648 [RefSeq]

See Genome Information for Microtus oregoni

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,017,107,361
Total ungapped length3,017,107,361
Number of contigs2,147
Contig N5034,833,828
Contig L5028
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2,147

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,017,107,3612,1473,017,107,36134,833,82800