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Source database (GenBank or RefSeq) File type

IWGSC CS RefSeq v2.1

Organism name:

Triticum aestivum (bread wheat)

Infraspecific name:

Cultivar: Chinese Spring

BioSample:

SAMN16451473

BioProject:

PRJNA669381

Submitter:

University of California, Davis

Date:

2021/05/06

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_018294505.1 (latest)

RefSeq assembly accession:

GCF_018294505.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

JAGHKL01

Assembly method:

FALCON v. 0.2.2; DenovoMAGIC v. 2

Expected final version:

Genome coverage:

234.0x

Sequencing technology:

PacBio; Illumina HiSeq

IDs: 10012721 [UID] 26630178 [GenBank] 28966678 [RefSeq]

See Genome Information for Triticum aestivum

Pathogen Detection Resources

There are 49 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_018294505.1	≠	GCF_018294505.1	IWGSC CS RefSeq v2.1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	14,566,954,962
Total ungapped length	14,314,496,886
Gaps between scaffolds	0
Number of scaffolds	91,589
Scaffold N50	713,360,525
Scaffold L50	10
Number of contigs	306,349
Contig N50	341,278
Contig L50	12,216
Total number of chromosomes and plasmids	22
Number of component sequences (WGS or clone)	91,589

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1A	CM031178.1	=	NC_057794.1	0
Chromosome 1B	CM031179.1	=	NC_057795.1	0
Chromosome 1D	CM031180.1	=	NC_057796.1	0
Chromosome 2A	CM031181.1	=	NC_057797.1	0
Chromosome 2B	CM031182.1	=	NC_057798.1	0
Chromosome 2D	CM031183.1	=	NC_057799.1	0
Chromosome 3A	CM031184.1	=	NC_057800.1	0
Chromosome 3B	CM031185.1	=	NC_057801.1	0
Chromosome 3D	CM031186.1	=	NC_057802.1	0
Chromosome 4A	CM031187.1	=	NC_057803.1	0
Chromosome 4B	CM031188.1	=	NC_057804.1	0
Chromosome 4D	CM031189.1	=	NC_057805.1	0
Chromosome 5A	CM031190.1	=	NC_057806.1	0
Chromosome 5B	CM031191.1	=	NC_057807.1	0
Chromosome 5D	CM031192.1	=	NC_057808.1	0
Chromosome 6A	CM031193.1	=	NC_057809.1	0
Chromosome 6B	CM031194.1	=	NC_057810.1	0
Chromosome 6D	CM031195.1	=	NC_057811.1	0
Chromosome 7A	CM031196.1	=	NC_057812.1	0
Chromosome 7B	CM031197.1	=	NC_057813.1	0
Chromosome 7D	CM031198.1	=	NC_057814.1	0
unplaced	n/a	n/a	n/a	91,567

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	14,566,502,436	91,588	14,314,044,360	713,360,525	214,760
Chromosome 1A	598,660,471	1	590,424,708	598,660,471	6,705
Chromosome 1B	700,547,350	1	687,983,847	700,547,350	8,712
Chromosome 1D	498,638,509	1	491,264,186	498,638,509	7,840
Chromosome 2A	787,782,082	1	777,763,573	787,782,082	9,030
Chromosome 2B	812,755,788	1	798,483,397	812,755,788	10,028
Chromosome 2D	656,544,405	1	647,033,963	656,544,405	9,301
Chromosome 3A	754,128,162	1	743,748,734	754,128,162	8,454
Chromosome 3B	851,934,019	1	831,697,678	851,934,019	10,885
Chromosome 3D	619,618,552	1	611,768,224	619,618,552	9,337
Chromosome 4A	754,227,511	1	741,420,734	754,227,511	9,053
Chromosome 4B	673,810,255	1	665,142,819	673,810,255	8,934
Chromosome 4D	518,332,611	1	511,913,209	518,332,611	7,335
Chromosome 5A	713,360,525	1	704,882,037	713,360,525	7,335
Chromosome 5B	714,697,677	1	704,467,749	714,697,677	9,139
Chromosome 5D	569,951,140	1	563,278,497	569,951,140	8,586
Chromosome 6A	622,669,697	1	614,330,411	622,669,697	6,599
Chromosome 6B	731,188,232	1	717,188,404	731,188,232	9,683
Chromosome 6D	495,380,293	1	488,353,671	495,380,293	7,250
Chromosome 7A	744,491,536	1	733,203,613	744,491,536	8,617
Chromosome 7B	764,072,961	1	749,150,148	764,072,961	10,714
Chromosome 7D	642,921,167	1	633,506,432	642,921,167	10,036
unplaced	340,789,493	91,567	307,038,326	10,996	31,187

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IWGSC CS RefSeq v2.1

See Genome Information for Triticum aestivum

Pathogen Detection Resources

There are 49 assemblies for this organism

History (Show revision history)

Comment

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Assembly Unit Name
Primary Assembly
non-nuclear