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GMGI_Hamer_2.0

Organism name:
Homarus americanus (American lobster)
Isolate:
GMGI-L3
Sex:
male
BioSample:
SAMN16248921
BioProject:
PRJNA655509
Submitter:
Gloucester Marine Genomics Institute, Inc.
Date:
2021/06/23
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_018991925.1 (latest)
RefSeq assembly accession:
GCF_018991925.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JAHLQT01
Assembly method:
MaSuRCA v. 3.3.9
Expected final version:
yes
Genome coverage:
110.0x
Sequencing technology:
Illumina HiSeq; Oxford Nanopore; Oxford Nanopore PromethION

IDs: 10375291 [UID] 27524048 [GenBank] 27811798 [RefSeq]

See Genome Information for Homarus americanus

History (Show revision history)

Comment

Global statistics

Total sequence length2,292,076,018
Total ungapped length2,291,242,282
Gaps between scaffolds0
Number of scaffolds47,246
Scaffold N50759,644
Scaffold L50242
Number of contigs55,596
Contig N50133,311
Contig L503,341
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)47,246

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,292,059,58647,2452,291,225,850759,6448,3500
MoleculeTotal
Length
Mitochondrion MT16,432