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Source database (GenBank or RefSeq) File type

ASM1932006v1

Organism name:

Cervus canadensis (even-toed ungulates)

Isolate:

Bull #8, Minnesota

Sex:

male

BioSample:

SAMN15814149

BioProject:

PRJNA657053

Submitter:

Iowa State University

Date:

2021/07/26

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_019320065.1 (latest)

RefSeq assembly accession:

GCF_019320065.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in GenBank: chromosome MT

Data displayed for RefSeq version

WGS Project:

JACTMD01

Assembly method:

MaSuRCA v. MAY-2018

Expected final version:

yes

Genome coverage:

686.0x

Sequencing technology:

PacBio RSII; Illumina HiSeq

IDs: 10568731 [UID] 28024148 [GenBank] 28655928 [RefSeq]

See Genome Information for Cervus canadensis

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_019320065.1	≠	GCF_019320065.1	ASM1932006v1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	2,526,613,007
Total ungapped length	2,524,706,785
Gaps between scaffolds	0
Number of scaffolds	185
Scaffold N50	77,654,944
Scaffold L50	13
Number of contigs	6,828
Contig N50	914,577
Contig L50	803
Total number of chromosomes and plasmids	35
Number of component sequences (WGS or clone)	185

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM033191.1	=	NC_057386.1	0
Chromosome 2	CM033192.1	=	NC_057387.1	0
Chromosome 3	CM033193.1	=	NC_057388.1	0
Chromosome 4	CM033194.1	=	NC_057389.1	0
Chromosome 5	CM033195.1	=	NC_057390.1	0
Chromosome 6	CM033196.1	=	NC_057391.1	0
Chromosome 7	CM033197.1	=	NC_057392.1	0
Chromosome 8	CM033198.1	=	NC_057393.1	0
Chromosome 9	CM033199.1	=	NC_057394.1	0
Chromosome 10	CM033200.1	=	NC_057395.1	0
Chromosome 11	CM033201.1	=	NC_057396.1	0
Chromosome 12	CM033202.1	=	NC_057397.1	0
Chromosome 13	CM033203.1	=	NC_057398.1	0
Chromosome 14	CM033204.1	=	NC_057399.1	0
Chromosome 15	CM033205.1	=	NC_057400.1	0
Chromosome 16	CM033206.1	=	NC_057401.1	0
Chromosome 17	CM033207.1	=	NC_057402.1	0
Chromosome 18	CM033208.1	=	NC_057403.1	0
Chromosome 19	CM033209.1	=	NC_057404.1	0
Chromosome 20	CM033210.1	=	NC_057405.1	0
Chromosome 21	CM033211.1	=	NC_057406.1	0
Chromosome 22	CM033212.1	=	NC_057407.1	0
Chromosome 23	CM033213.1	=	NC_057408.1	0
Chromosome 24	CM033214.1	=	NC_057409.1	0
Chromosome 25	CM033215.1	=	NC_057410.1	0
Chromosome 26	CM033216.1	=	NC_057411.1	0
Chromosome 27	CM033217.1	=	NC_057412.1	0
Chromosome 28	CM033218.1	=	NC_057413.1	0
Chromosome 29	CM033219.1	=	NC_057414.1	0
Chromosome 30	CM033220.1	=	NC_057415.1	0
Chromosome 31	CM033221.1	=	NC_057416.1	0
Chromosome 32	CM033222.1	=	NC_057417.1	0
Chromosome 33	CM033223.1	=	NC_057418.1	0
Chromosome X	CM033224.1	=	NC_057419.1	0
Chromosome Y	CM033225.1	=	NC_057420.1	0
unplaced	n/a	n/a	n/a	150

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	2,526,613,007	185	2,524,706,785	77,654,944	6,643
Chromosome 1	127,605,827	1	127,557,893	127,605,827	208
Chromosome 2	114,865,875	1	114,783,516	114,865,875	236
Chromosome 3	114,606,702	1	114,516,622	114,606,702	263
Chromosome 4	105,318,381	1	105,245,172	105,318,381	236
Chromosome 5	101,869,976	1	101,807,277	101,869,976	239
Chromosome 6	96,780,817	1	96,709,902	96,780,817	194
Chromosome 7	94,470,602	1	94,417,190	94,470,602	195
Chromosome 8	92,076,199	1	92,015,894	92,076,199	179
Chromosome 9	84,228,583	1	84,167,352	84,228,583	204
Chromosome 10	82,287,371	1	82,237,342	82,287,371	173
Chromosome 11	78,153,912	1	78,113,652	78,153,912	137
Chromosome 12	77,654,944	1	77,614,794	77,654,944	146
Chromosome 13	76,089,960	1	76,027,841	76,089,960	142
Chromosome 14	74,494,459	1	74,413,174	74,494,459	181
Chromosome 15	74,380,151	1	74,340,768	74,380,151	160
Chromosome 16	67,981,682	1	67,929,407	67,981,682	141
Chromosome 17	65,378,136	1	65,345,912	65,378,136	105
Chromosome 18	64,413,554	1	64,375,947	64,413,554	159
Chromosome 19	62,010,818	1	61,973,619	62,010,818	122
Chromosome 20	60,444,953	1	60,413,581	60,444,953	147
Chromosome 21	59,747,184	1	59,716,458	59,747,184	123
Chromosome 22	59,530,028	1	59,484,475	59,530,028	117
Chromosome 23	58,383,784	1	58,347,172	58,383,784	101
Chromosome 24	54,121,439	1	54,087,310	54,121,439	104
Chromosome 25	53,619,048	1	53,590,553	53,619,048	92
Chromosome 26	52,893,355	1	52,850,871	52,893,355	124
Chromosome 27	52,039,427	1	52,005,075	52,039,427	94
Chromosome 28	51,438,166	1	51,400,983	51,438,166	109
Chromosome 29	48,396,561	1	48,367,201	48,396,561	101
Chromosome 30	44,123,562	1	44,090,157	44,123,562	94
Chromosome 31	42,799,129	1	42,782,860	42,799,129	56
Chromosome 32	40,102,283	1	40,080,711	40,102,283	61
Chromosome 33	38,432,887	1	38,416,984	38,432,887	84
Chromosome X	146,388,637	1	146,017,036	146,388,637	1,682
Chromosome Y	7,618,728	1	7,601,130	7,618,728	115
unplaced	1,865,887	150	1,860,954	25,000	19

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ASM1932006v1

See Genome Information for Cervus canadensis

Pathogen Detection Resources

History (Show revision history)

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