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gsc_jax_bbear_1.0

Organism name:
Ursus americanus (American black bear)
Infraspecific name:
Ecotype: Eastern
Isolate:
UA15103
BioSample:
SAMN22511336
BioProject:
PRJNA319796
Submitter:
Jackson Laboratory
Date:
2021/11/24
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_020975775.1 (latest)
RefSeq assembly accession:
GCF_020975775.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in GenBank: 1 unlocalized scaffold on chromosome MT
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JAJHTY01
Assembly method:
Flye v. 2.8.1-b1676; Nextpolish v. JULY-2021
Expected final version:
no
Genome coverage:
11.0x
Sequencing technology:
PacBio

IDs: 11503751 [UID] 30283388 [GenBank] 30836058 [RefSeq]

See Genome Information for Ursus americanus

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,351,964,450
Total ungapped length2,351,964,450
Number of contigs2,213
Contig N5013,882,922
Contig L5043
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)2,213

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,351,947,6092,2122,351,947,60913,882,92200
MoleculeTotal
Length
Mitochondrion MT16,841