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ASM2101889v1

Organism name:
Seriola aureovittata (bony fishes)
Infraspecific name:
Ecotype: China
Isolate:
HTS-2021-v1
Sex:
pooled male and female
BioSample:
SAMN20750612
BioProject:
PRJNA754209
Submitter:
Yellow Sea Fisheries Research Institute
Date:
2021/12/02
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_021018895.1 (latest)
RefSeq assembly accession:
GCF_021018895.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JAIQDC01
Assembly method:
wtdbg2 v. 2.5
Expected final version:
yes
Genome coverage:
165x
Sequencing technology:
PacBio Sequel

IDs: 11536021 [UID] 30378518 [GenBank] 42844248 [RefSeq]

See Genome Information for Seriola aureovittata

Pathogen Detection Resources

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length647,095,223
Total ungapped length647,019,723
Gaps between scaffolds0
Number of scaffolds31
Scaffold N5028,520,646
Scaffold L5011
Number of contigs181
Contig N5017,994,190
Contig L5014
Total number of chromosomes and plasmids24
Number of component sequences (WGS or clone)31

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_021018925.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM037560.1=NC_079364.10
Chromosome 2CM037561.1=NC_079365.10
Chromosome 3CM037562.1=NC_079366.10
Chromosome 4CM037563.1=NC_079367.10
Chromosome 5CM037564.1=NC_079368.10
Chromosome 6CM037565.1=NC_079369.10
Chromosome 7CM037566.1=NC_079370.10
Chromosome 8CM037567.1=NC_079371.10
Chromosome 9CM037568.1=NC_079372.10
Chromosome 10CM037569.1=NC_079373.10
Chromosome 11CM037570.1=NC_079374.10
Chromosome 12CM037571.1=NC_079375.10
Chromosome 13CM037572.1=NC_079376.10
Chromosome 14CM037573.1=NC_079377.10
Chromosome 15CM037574.1=NC_079378.10
Chromosome 16CM037575.1=NC_079379.10
Chromosome 17CM037576.1=NC_079380.10
Chromosome 18CM037577.1=NC_079381.10
Chromosome 19CM037578.1=NC_079382.10
Chromosome 20CM037579.1=NC_079383.10
Chromosome 21CM037580.1=NC_079384.10
Chromosome 22CM037581.1=NC_079385.10
Chromosome 23CM037582.1=NC_079386.10
Chromosome 24CM037583.1=NC_079387.10
unplacedn/an/an/a7

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All647,095,22331647,019,72328,520,6461500
Chromosome 134,595,819134,589,81934,595,819120
Chromosome 231,990,549131,990,54931,990,54900
Chromosome 331,986,941131,982,94131,986,94180
Chromosome 431,798,618131,774,61831,798,618480
Chromosome 530,838,784130,837,78430,838,78420
Chromosome 630,246,452130,244,95230,246,45230
Chromosome 729,831,536129,829,03629,831,53650
Chromosome 829,467,215129,466,71529,467,21510
Chromosome 929,441,676129,440,17629,441,67630
Chromosome 1028,686,258128,682,75828,686,25870
Chromosome 1128,520,646128,516,64628,520,64680
Chromosome 1227,675,246127,671,24627,675,24680
Chromosome 1326,773,912126,773,91226,773,91200
Chromosome 1426,702,008126,702,00826,702,00800
Chromosome 1526,416,037126,415,53726,416,03710
Chromosome 1625,927,330125,924,33025,927,33060
Chromosome 1725,651,131125,649,63125,651,13130
Chromosome 1825,171,948125,171,94825,171,94800
Chromosome 1924,391,175124,391,17524,391,17500
Chromosome 2023,976,901123,972,40123,976,90190
Chromosome 2122,659,167122,656,66722,659,16750
Chromosome 2221,926,445121,922,44521,926,44580
Chromosome 2320,077,882120,075,38220,077,88250
Chromosome 2412,269,480112,264,98012,269,48080
unplaced72,067772,06712,00100