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myiCay2020

Organism name:
Myiozetetes cayanensis (birds)
Isolate:
MyiCay16
Sex:
female
BioSample:
SAMN25990114
BioProject:
PRJNA807488
Submitter:
Max Planck Institute for Biological Intelligence, in foundation, Seewiesen
Date:
2022/03/10
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_022539395.1 (latest)
RefSeq assembly accession:
GCF_022539395.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JAKSEM01
Assembly method:
CSA v. 2.6; flye polish v. 02.7.1-b1590
Expected final version:
yes
Genome coverage:
14x ONT; 40x Illumina
Sequencing technology:
oxford nanopore; Illumina

IDs: 12303361 [UID] 32222208 [GenBank] 35276368 [RefSeq]

See Genome Information for Myiozetetes cayanensis

History (Show revision history)

Comment

Global statistics

Total sequence length1,075,628,138
Total ungapped length1,074,257,782
Gaps between scaffolds0
Number of scaffolds1,692
Scaffold N5063,679,618
Scaffold L506
Number of contigs1,873
Contig N5012,993,567
Contig L5024
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,692

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,075,628,1381,6921,074,257,78263,679,6181810