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OEROSLIN_1.1

Organism name:
Ostrea edulis (bivalves)
Isolate:
OE_ROSLIN_2020
BioSample:
SAMN22566556
BioProject:
PRJNA772111
Submitter:
AquaLeap
Date:
2022/04/27
Release type:
Minor
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_023158985.1 (latest)
RefSeq assembly accession:
GCF_023158985.2 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for GenBank version
WGS Project:
JAJSPN01
Assembly method:
Flye v. 2.7-b1585; wtdbg2 v. 2.5; Quickmerge v. 0.3; Pilon v. 1.23
Expected final version:
yes
Genome coverage:
120.0x
Sequencing technology:
Oxford Nanopore PromethION

IDs: 12613151 [UID] 33008768 [GenBank] 34388568 [RefSeq]

See Genome Information for Ostrea edulis

There are 5 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length935,138,052
Total ungapped length934,984,802
Gaps between scaffolds0
Number of scaffolds1,363
Scaffold N5095,564,955
Scaffold L505
Number of contigs2,897
Contig N501,809,825
Contig L50129
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,363

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced935,138,0521,363934,984,80295,564,9551,5340