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ASM2337382v1

Organism name:
Bactrocera dorsalis (oriental fruit fly)
Isolate:
Fly_Bdor
Sex:
female
BioSample:
SAMN24567582
BioProject:
PRJNA793623
Submitter:
CAS Center for Excellence in Molecular Plant Sciences
Date:
2022/05/16
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_023373825.1 (latest)
RefSeq assembly accession:
GCF_023373825.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JAKCWC01
Assembly method:
NextDenovo v. 2.4.0
Expected final version:
yes
Genome coverage:
80.0x
Sequencing technology:
PacBio Sequel

IDs: 12727241 [UID] 33284068 [GenBank] 34019978 [RefSeq]

See Genome Information for Bactrocera dorsalis

Pathogen Detection Resources

There are 7 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length530,326,621
Total ungapped length529,784,621
Gaps between scaffolds0
Number of scaffolds587
Scaffold N5093,297,747
Scaffold L503
Number of contigs1,671
Contig N501,523,498
Contig L5079
Total number of chromosomes and plasmids7
Number of component sequences (WGS or clone)587

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_023374005.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM041770.1=NC_064303.10
Chromosome 2CM041771.1=NC_064304.10
Chromosome 3CM041772.1=NC_064305.10
Chromosome 4CM041773.1=NC_064306.10
Chromosome 5CM041774.1=NC_064307.10
Chromosome 6CM041775.1=NC_064308.10
unplacedn/an/an/a580

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All530,310,706586529,768,70693,297,7471,0840
Chromosome 1114,943,1871114,787,687114,943,1873110
Chromosome 2106,640,4611106,526,961106,640,4612270
Chromosome 393,297,747193,205,74793,297,7471840
Chromosome 474,755,765174,683,76574,755,7651440
Chromosome 574,733,959174,645,45974,733,9591770
Chromosome 642,482,483142,463,98342,482,483370
unplaced23,457,10458023,455,10461,67240
MoleculeTotal
Length
Mitochondrion MT15,915