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Source database (GenBank or RefSeq) File type

BBRACH_0.4

Organism name:

Brienomyrus brachyistius (bony fishes)

Isolate:

T26

Sex:

male

BioSample:

SAMN28860763

BioProject:

PRJNA845764

Submitter:

Michigan State University

Date:

2022/06/28

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_023856365.1 (latest)

RefSeq assembly accession:

GCF_023856365.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in GenBank: chromosome MT

Data displayed for RefSeq version

WGS Project:

JAMWYG01

Assembly method:

hifiasm v. 0.13-r308

Expected final version:

yes

Genome coverage:

20.0x

Sequencing technology:

PacBio Sequel; Illumina

IDs: 13092061 [UID] 34228388 [GenBank] 34300318 [RefSeq]

See Genome Information for Brienomyrus brachyistius

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_023856365.1	≠	GCF_023856365.1	BBRACH_0.4	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	988,088,817
Total ungapped length	987,976,265
Gaps between scaffolds	0
Number of scaffolds	1,425
Scaffold N50	27,298,164
Scaffold L50	14
Number of contigs	1,659
Contig N50	4,190,077
Contig L50	63
Total number of chromosomes and plasmids	25
Number of component sequences (WGS or clone)	1,425

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM043635.1	=	NC_064533.1	0
Chromosome 2	CM043636.1	=	NC_064534.1	0
Chromosome 3	CM043637.1	=	NC_064535.1	0
Chromosome 4	CM043638.1	=	NC_064536.1	0
Chromosome 5	CM043639.1	=	NC_064537.1	0
Chromosome 6	CM043640.1	=	NC_064538.1	0
Chromosome 7	CM043641.1	=	NC_064539.1	0
Chromosome 8	CM043642.1	=	NC_064540.1	0
Chromosome 9	CM043643.1	=	NC_064541.1	0
Chromosome 10	CM043644.1	=	NC_064542.1	0
Chromosome 11	CM043645.1	=	NC_064543.1	0
Chromosome 12	CM043646.1	=	NC_064544.1	0
Chromosome 13	CM043647.1	=	NC_064545.1	0
Chromosome 14	CM043648.1	=	NC_064546.1	0
Chromosome 15	CM043649.1	=	NC_064547.1	0
Chromosome 16	CM043650.1	=	NC_064548.1	0
Chromosome 17	CM043651.1	=	NC_064549.1	0
Chromosome 18	CM043652.1	=	NC_064550.1	0
Chromosome 19	CM043653.1	=	NC_064551.1	0
Chromosome 20	CM043654.1	=	NC_064552.1	0
Chromosome 21	CM043655.1	=	NC_064553.1	0
Chromosome 22	CM043656.1	=	NC_064554.1	0
Chromosome 23	CM043657.1	=	NC_064555.1	0
Chromosome 24	CM043658.1	=	NC_064556.1	0
Chromosome 25	CM043659.1	=	NC_064557.1	0
unplaced	n/a	n/a	n/a	1,400

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	988,088,817	1,425	987,976,265	27,298,164	234
Chromosome 1	56,739,146	1	56,734,646	56,739,146	9
Chromosome 2	49,849,581	1	49,845,581	49,849,581	8
Chromosome 3	37,290,141	1	37,281,641	37,290,141	17
Chromosome 4	41,855,408	1	41,850,408	41,855,408	10
Chromosome 5	39,554,573	1	39,547,529	39,554,573	15
Chromosome 6	32,292,788	1	32,289,788	32,292,788	6
Chromosome 7	32,095,073	1	32,090,573	32,095,073	9
Chromosome 8	30,661,778	1	30,660,778	30,661,778	2
Chromosome 9	30,194,871	1	30,189,371	30,194,871	11
Chromosome 10	29,998,957	1	29,995,957	29,998,957	6
Chromosome 11	29,449,873	1	29,445,873	29,449,873	8
Chromosome 12	27,905,563	1	27,904,063	27,905,563	3
Chromosome 13	27,298,164	1	27,295,664	27,298,164	5
Chromosome 14	25,891,040	1	25,888,540	25,891,040	5
Chromosome 15	24,254,349	1	24,252,262	24,254,349	5
Chromosome 16	29,139,398	1	29,137,398	29,139,398	4
Chromosome 17	23,539,562	1	23,537,062	23,539,562	5
Chromosome 18	22,908,932	1	22,904,932	22,908,932	8
Chromosome 19	21,748,681	1	21,747,181	21,748,681	3
Chromosome 20	20,742,504	1	20,738,479	20,742,504	9
Chromosome 21	20,253,505	1	20,250,505	20,253,505	6
Chromosome 22	19,448,269	1	19,443,769	19,448,269	9
Chromosome 23	22,430,033	1	22,427,033	22,430,033	6
Chromosome 24	9,642,008	1	9,640,508	9,642,008	3
Chromosome 25	12,877,714	1	12,874,714	12,877,714	6
unplaced	270,026,906	1,400	270,002,010	690,299	56

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BBRACH_0.4

See Genome Information for Brienomyrus brachyistius

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

Comment

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