iqSchSeri2.2

Organism name:: Schistocerca serialis cubense (grasshoppers)
Isolate:: TAMUIC-IGC-003099
Sex:: female
BioSample:: SAMN18214785
BioProject:: PRJNA772266
Submitter:: Behavioral Plasticity Research Institute (BPRI)
Date:: 2022/06/28
Release type:: minor
Assembly level:: Chromosome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_023864345.3 (latest)
RefSeq assembly accession:: GCF_023864345.2 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JAMRYF01
Assembly method:: HiFiASM v. 0.15.4; 3D-DNA v. 210817; Juicebox Assembly Tools v. 1.11
Expected final version:: yes
Genome coverage:: 30.0x
Sequencing technology:: PacBio Sequel; Illumina NovaSeq

IDs: 13370491 [UID] 34900758 [GenBank] 34900778 [RefSeq]

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_023864345.3	=	GCF_023864345.2	iqSchSeri2.2	Chromosome	Latest GenBank, Latest RefSeq
GCA_023864345.2	n/a	n/a	iqSchSeri2.1	Chromosome	Replaced GenBank
GCA_023864345.1	n/a	n/a	iqSchSeri2.1	Chromosome	Replaced GenBank

In July 2022 1 sequence was suppressed because it was found to be a contaminant.

Total sequence length	9,082,822,131
Total ungapped length	9,082,566,999
Gaps between scaffolds	0
Number of scaffolds	1,455
Scaffold N50	849,285,246
Scaffold L50	5
Number of contigs	1,968
Contig N50	39,994,732
Contig L50	66
Total number of chromosomes and plasmids	13
Number of component sequences (WGS or clone)	1,455

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM043684.1	=	NC_064638.1	0
Chromosome 2	CM043685.1	=	NC_064639.1	0
Chromosome 3	CM043686.1	=	NC_064640.1	0
Chromosome 4	CM043687.1	=	NC_064641.1	0
Chromosome 5	CM043688.1	=	NC_064642.1	0
Chromosome 6	CM043689.1	=	NC_064643.1	0
Chromosome 7	CM043690.1	=	NC_064644.1	0
Chromosome 8	CM043691.1	=	NC_064645.1	0
Chromosome 9	CM043692.1	=	NC_064646.1	0
Chromosome 10	CM043693.1	=	NC_064647.1	0
Chromosome 11	CM043694.1	=	NC_064648.1	0
Chromosome 12	CM043695.1	=	NC_064649.1	0
unplaced	n/a	n/a	n/a	1,442

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	9,082,806,520	1,454	9,082,551,388	849,285,246	513
Chromosome 1	1,287,071,271	1	1,287,043,232	1,287,071,271	57
Chromosome 2	1,163,909,630	1	1,163,878,630	1,163,909,630	62
Chromosome 3	1,099,911,349	1	1,099,882,349	1,099,911,349	58
Chromosome 4	985,230,036	1	985,203,536	985,230,036	53
Chromosome 5	849,285,246	1	849,271,746	849,285,246	27
Chromosome 6	776,297,384	1	776,284,822	776,297,384	26
Chromosome 7	646,245,375	1	646,231,375	646,245,375	28
Chromosome 8	639,668,871	1	639,657,871	639,668,871	22
Chromosome 9	554,751,491	1	554,736,491	554,751,491	30
Chromosome 10	253,769,639	1	253,759,139	253,769,639	21
Chromosome 11	214,181,679	1	214,154,679	214,181,679	54
Chromosome 12	205,406,625	1	205,396,125	205,406,625	21
unplaced	407,077,924	1,442	407,051,393	10,756,477	54

Assembly Unit Name
Primary Assembly
non-nuclear