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ASM2436296v1

Organism name:
Panthera pardus (leopard)
Isolate:
Hobbes
Sex:
male
BioSample:
SAMN23235441
BioProject:
PRJNA847351
Submitter:
Stanford University
Date:
2022/07/21
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_024362965.1 (latest)
RefSeq assembly accession:
GCF_024362965.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JANFAR01
Assembly method:
Hifiasm v. 0.9-r289; Juicebox/Juicer v. 180922
Expected final version:
yes
Genome coverage:
25x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_024363415.1 (alternate pseudohaplotype of diploid)

IDs: 13333331 [UID] 34806428 [GenBank] 40934638 [RefSeq]

See Genome Information for Panthera pardus

There are 6 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,441,343,278
Total ungapped length2,441,180,016
Gaps between scaffolds0
Number of scaffolds382
Scaffold N50126,810,544
Scaffold L508
Number of contigs717
Contig N5022,236,240
Contig L5032
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)382

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,441,326,3143812,441,163,052126,810,5443350
MoleculeTotal
Length
Mitochondrion MT16,964