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iyMicDemo2.1a

Organism name:
Microplitis demolitor (wasps, ants & bees)
Isolate:
Queensland-Clemson2020A
Sex:
male
BioSample:
SAMN29911678
BioProject:
PRJNA861375
Submitter:
USDA-ARS
Date:
2023/02/13
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_026212275.2 (latest)
RefSeq assembly accession:
GCF_026212275.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JANIEV01
Assembly method:
HiFiASM v. 0.16.0-r369
Expected final version:
yes
Genome coverage:
49.0x
Sequencing technology:
PacBio Sequel

IDs: 15880411 [UID] 40758918 [GenBank] 40782088 [RefSeq]

See Genome Information for Microplitis demolitor

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

In Feb 2023 the sequence of chromosome 3 was corrected, producing CM047889.2 (and its component JANIEV010000003.2)

Global statistics

Total sequence length225,878,136
Total ungapped length225,870,236
Gaps between scaffolds0
Number of scaffolds31
Scaffold N5023,799,781
Scaffold L505
Number of contigs110
Contig N505,316,196
Contig L5015
Total number of chromosomes and plasmids10
Number of component sequences (WGS or clone)31

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_026212315.2)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM047887.1=NC_068545.10
Chromosome 2CM047888.1=NC_068546.10
Chromosome 3CM047889.2=NC_068547.10
Chromosome 4CM047890.1=NC_068548.10
Chromosome 5CM047891.1=NC_068549.10
Chromosome 6CM047892.1=NC_068550.10
Chromosome 7CM047893.1=NC_068551.10
Chromosome 8CM047894.1=NC_068552.10
Chromosome 9CM047895.1=NC_068553.10
Chromosome 10CM047896.1=NC_068554.10
unplacedn/an/an/a21

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All225,878,13631225,870,23623,799,781790
Chromosome 124,747,562124,746,76224,747,56280
Chromosome 224,372,730124,371,53024,372,730120
Chromosome 324,349,923124,349,72324,349,92320
Chromosome 424,262,844124,262,34424,262,84450
Chromosome 523,799,781123,798,88123,799,78190
Chromosome 622,892,290122,891,59022,892,29070
Chromosome 722,717,856122,717,25622,717,85660
Chromosome 820,760,521120,759,72120,760,52180
Chromosome 919,595,550119,594,55019,595,550100
Chromosome 1017,637,187117,635,98717,637,187120
unplaced741,89221741,89249,18900