U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Auburn_PproV2

Organism name:
Poeciliopsis prolifica (blackstripe livebearer)
Infraspecific name:
Strain: line A6
Sex:
male
BioSample:
SAMN31431695
BioProject:
PRJNA893701
Submitter:
Auburn University
Date:
2022/12/28
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_027474105.1 (latest)
RefSeq assembly accession:
GCF_027474105.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JAPDDK01
Assembly method:
CANU v. 2.0; Supernova v. 2.1.1; quickmerge v. 0.3.0
Expected final version:
yes
Genome coverage:
205.0x
Sequencing technology:
PacBio Sequel; Illumina NovaSeq

IDs: 15192751 [UID] 39143588 [GenBank] 41928688 [RefSeq]

See Genome Information for Poeciliopsis prolifica

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length674,152,735
Total ungapped length674,107,802
Gaps between scaffolds0
Number of scaffolds415
Scaffold N508,077,358
Scaffold L5023
Number of contigs504
Contig N507,689,806
Contig L5025
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)415

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced674,152,735415674,107,8028,077,358890