U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM2901754v1

Organism name:
Prosopis cineraria (eudicots)
Infraspecific name:
Cultivar: Desert tree
Isolate:
PC_DT_omini
BioSample:
SAMN28406153
BioProject:
PRJNA838117
Submitter:
UAE University
Date:
2023/03/06
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_029017545.1 (latest)
RefSeq assembly accession:
GCF_029017545.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome Pltd
  • Data displayed for RefSeq version
WGS Project:
JAQQQA01
Assembly method:
CANU v. 1.6
Expected final version:
yes
Genome coverage:
213.0x
Sequencing technology:
Illumina HiSeq; Illumina NextSeq; PacBio RSII; PacBio Sequel

IDs: 16082141 [UID] 41251138 [GenBank] 41668578 [RefSeq]

See Genome Information for Prosopis cineraria

History (Show revision history)

Comment

Global statistics

Total sequence length691,555,879
Total ungapped length691,386,579
Gaps between scaffolds0
Number of scaffolds2,266
Scaffold N5041,482,946
Scaffold L508
Number of contigs3,959
Contig N50641,556
Contig L50238
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)2,266

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced691,392,2022,265691,222,90241,482,9461,6930
MoleculeTotal
Length
Chloroplast Pltd163,677