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IMG-taxon 2690315601 annotated assembly

Organism name:
Acinetobacter apis (g-proteobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: ANC 5114
BioSample:
SAMN05444584
BioProject:
PRJEB21552
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2017/06/29
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_900197575.1 (latest)
RefSeq assembly accession:
GCF_900197575.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FZLN01
Genome coverage:
623x

IDs: 1150671 [UID] 4659918 [GenBank] 4670158 [RefSeq]

See Genome Information for Acinetobacter apis

History (Show revision history)

Comment

Global statistics

Total sequence length2,413,782
Total ungapped length2,413,598
Gaps between scaffolds0
Number of scaffolds12
Scaffold N501,380,796
Scaffold L501
Number of contigs13
Contig N501,380,796
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)12

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,413,782122,413,5981,380,79610

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter apisAcinetobacter apis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_015627125.1Acinetobacter rathckeaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type81.4113.8112.10

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna