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fCotGob3.1

Organism name:
Cottoperca gobio (bony fishes)
BioSample:
SAMEA104242975
Submitter:
SC
Date:
2019/02/06
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_900634415.1 (latest)
RefSeq assembly accession:
GCF_900634415.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CAAAFJ01
Genome coverage:
75x
Linked assembly:
GCA_900634435.1 (alternate pseudohaplotype of diploid)

IDs: 2275201 [UID] 8516498 [GenBank] 9031988 [RefSeq]

See Genome Information for Cottoperca gobio

Pathogen Detection Resources

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length609,391,784
Total ungapped length606,837,818
Gaps between scaffolds0
Number of scaffolds322
Scaffold N5025,156,145
Scaffold L5011
Number of contigs766
Contig N506,330,900
Contig L5027
Total number of chromosomes and plasmids24
Number of component sequences (WGS or clone)322

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_900634414.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1LR131916.1=NC_041355.10
Chromosome 2LR131927.1=NC_041356.10
Chromosome 3LR131933.1=NC_041357.10
Chromosome 4LR131934.1=NC_041358.10
Chromosome 5LR131935.1=NC_041359.10
Chromosome 6LR131936.1=NC_041360.10
Chromosome 7LR131937.1=NC_041361.10
Chromosome 8LR131938.1=NC_041362.10
Chromosome 9LR131939.1=NC_041363.10
Chromosome 10LR131917.1=NC_041364.10
Chromosome 11LR131918.1=NC_041365.10
Chromosome 12LR131919.1=NC_041366.10
Chromosome 13LR131920.1=NC_041367.10
Chromosome 14LR131921.1=NC_041368.10
Chromosome 15LR131922.1=NC_041369.10
Chromosome 16LR131923.1=NC_041370.10
Chromosome 17LR131924.1=NC_041371.10
Chromosome 18LR131925.1=NC_041372.10
Chromosome 19LR131926.1=NC_041373.10
Chromosome 20LR131928.1=NC_041374.10
Chromosome 21LR131929.1=NC_041375.10
Chromosome 22LR131930.1=NC_041376.10
Chromosome 23LR131931.1=NC_041377.10
Chromosome 24LR131932.1=NC_041378.10
unplacedn/an/an/a298

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All609,391,784322606,837,81825,156,1454440
Chromosome 127,055,867127,054,71727,055,867100
Chromosome 212,923,129112,922,37912,923,12960
Chromosome 330,028,995130,027,94530,028,995130
Chromosome 428,949,045128,853,77028,949,045100
Chromosome 530,479,438130,026,87130,479,438120
Chromosome 627,680,345127,678,94527,680,345150
Chromosome 723,069,680123,025,22023,069,680160
Chromosome 823,432,536123,402,84923,432,536170
Chromosome 930,072,547129,570,50730,072,547110
Chromosome 1027,438,269127,437,37627,438,26990
Chromosome 1122,193,419122,142,94722,193,419140
Chromosome 1222,902,521122,901,27122,902,52190
Chromosome 1327,742,916127,531,92027,742,916160
Chromosome 1425,704,503125,460,30425,704,503110
Chromosome 1524,963,210124,732,11924,963,210320
Chromosome 1626,581,398126,578,88326,581,398190
Chromosome 1725,156,145125,154,29525,156,145130
Chromosome 1814,930,383114,787,56014,930,383230
Chromosome 1921,060,126121,058,12521,060,126140
Chromosome 2017,599,799117,599,19917,599,79940
Chromosome 2124,104,793123,995,78424,104,793110
Chromosome 2222,609,112122,608,23722,609,11280
Chromosome 2315,932,363115,649,06015,932,36330
Chromosome 2422,441,820122,306,02622,441,820370
unplaced34,339,42529834,331,509207,5291110