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ASM90518823v1

Organism name:
Serratia sp. Tan611 (enterobacteria)
Taxonomy check:
OK
Isolate:
Serratia sp. Tan611
BioSample:
SAMEA7322502
BioProject:
PRJEB40361
Submitter:
GMGM
Date:
2021/02/01
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_905188235.1 (latest)
RefSeq assembly accession:
GCF_905188235.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Genome coverage:
168x

IDs: 9217861 [UID] 24828988 [GenBank] 24951198 [RefSeq]

See Genome Information for Serratia sp. Tan611

History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::08/06/2023 03:55:46
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.5
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::4,696
CDSs (total)::4,580
Genes (coding)::4,532
CDSs (with protein)::4,532
Genes (RNA)::116
rRNAs::8, 7, 7 (5S, 16S, 23S)
complete rRNAs::8, 7, 7 (5S, 16S, 23S)
tRNAs::84
ncRNAs::10
Pseudo Genes (total)::48
CDSs (without protein)::48
Pseudo Genes (ambiguous residues)::0 of 48
Pseudo Genes (frameshifted)::14 of 48
Pseudo Genes (incomplete)::38 of 48
Pseudo Genes (internal stop)::7 of 48
Pseudo Genes (multiple problems)::8 of 48
CRISPR Arrays::2
##Genome-Annotation-Data-END##

Global statistics

Total sequence length4,963,609
Total ungapped length4,963,609
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_905188234.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome LR994655.1=NZ_LR994655.1

Assembly statistics

MoleculeTotal
Length
Chromosome 4,963,609

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Serratia sp. Tan611Serratia sp. Tan611

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_009817885.1Serratia rhizosphaeraetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type97.1690.7088.31

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna