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PHOROB

Organism name:
Phodopus roborovskii (desert hamster)
BioSample:
SAMEA9952654
BioProject:
PRJEB47530
Submitter:
FREIE UNIVERSITAET BERLIN
Date:
2022/07/01
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_943737965.1 (latest)
RefSeq assembly accession:
GCF_943737965.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
CALSGD01
Genome coverage:
34x

IDs: 13231611 [UID] 34566018 [GenBank] 36552258 [RefSeq]

See Genome Information for Phodopus roborovskii

Pathogen Detection Resources

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,384,239,561
Total ungapped length2,384,239,561
Number of contigs2,079
Contig N5025,775,705
Contig L5030
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)2,079

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,384,223,2882,0782,384,223,28825,775,70500
MoleculeTotal
Length
Mitochondrion MT16,273