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plastics_colonisation_sample_133

Organism name:
Serratia sp. PL4 (enterobacteria)
Taxonomy check:
OK
Isolate:
plastics_colonisation_sample_133
BioSample:
SAMEA110407940
BioProject:
PRJEB53346
Submitter:
University of Exeter
Date:
2022/09/11
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_945956885.1 (latest)
RefSeq assembly accession:
GCF_945956885.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CAMFJC01
Genome coverage:
25x

IDs: 13800791 [UID] 35907698 [GenBank] 36039098 [RefSeq]

See Genome Information for Serratia sp. PL4

History (Show revision history)

Comment

isolate_13

Global statistics

Total sequence length5,218,760
Total ungapped length5,218,760
Number of contigs30
Contig N502,874,999
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)30

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,218,760305,218,7602,874,99900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Serratia sp. PL4Serratia sp. PL4

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_008011855.1Serratia bockelmanniitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type98.8492.0090.74

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna