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Genome Information for Macrochelys suwanniensis
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The Suwannee snapping turtle (Macrochelys suwanniensis) is a very large freshwater turtle in the family Chelydridae. This species is endemic to the southeastern United States, where it only inhabits the Suwannee River basin (modified from Wikipedia). This sample is from a male in the Suwannee River basin, Florida, collected Kevin Enge of Florida Fish and Wildlife Conservation Commission, coordinated by Robert Murphy, Paul Moler, Rebecca Hardman, and Kathleen Horan, and used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis.
| Accession | PRJNA1008721 |
| Type | Umbrella project |
| Organism | Macrochelys suwanniensis[Taxonomy ID: 3026461] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelydroidea; Chelydridae; Macrochelys; Macrochelys suwanniensis |
| Submission | Registration date: 23-Aug-2023
Vertebrate Genomes Project |
| Relevance | Reference genome |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 54 |
| WGS master | 2 |
| SRA Experiments | 17 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes SRA or Trace Total |
2
1
3
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA1006849 | Chromosomes | Macrochelys suwanniensis | Macrochelys suwanniensis (Suwannee snapping turtle) genome, rMacSuw1, haplotype 2 (Vertebrate Genomes Project) | | PRJNA1006848 | Chromosomes | Macrochelys suwanniensis | Macrochelys suwanniensis (Suwannee snapping turtle) genome, rMacSuw1, haplotype 1 (Vertebrate Genomes Project) | | PRJNA1151972 | SRA or Trace | Macrochelys suwanniensis (Suwannee snapping turtle) genome, rMacSuw1, sequence data | Macrochelys suwanniensis (Suwannee snapping turtle) genome, rMacSuw1, sequence data (Vertebrate Genomes Project) |
|