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Accession: PRJNA1019301 ID: 1019301

Stenotrophomonas sp.

Use clinical bacterial culture to understand the composition of species, identity, prevalence, resistance, pathogenicity and in Stenotrophomonas maltophilia complex. Assembly

Analyze newly sequenced clinical isolates from diverse regions in China together with genomes from public database. More...
AccessionPRJNA1019301
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsLi K et al., "Stenotrophomonas maltophilia complex: insights into evolutionary relationships, global distribution and pathogenicity.", Front Cell Infect Microbiol, 2023;13:1325379
SubmissionRegistration date: 20-Sep-2023
Chinese Center for Disease Control and Prevention
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)90
Publications
PubMed1
PMC1
Other datasets
BioSample90
Assembly90
Assembly details:
Assembly levelNumber of Assemblies
90
90
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_036322145.1ScaffoldJAWISQ000000000SAMN37432892
SMYL76
GCA_036319825.1ScaffoldJAWISF000000000SAMN37432881
SMYL1
GCA_036319805.1ScaffoldJAWISG000000000SAMN37432882
SMYL4
GCA_036319785.1ScaffoldJAWISI000000000SAMN37432884
SMYL19
GCA_036319765.1ScaffoldJAWISH000000000SAMN37432883
SMYL9
GCA_036319745.1ScaffoldJAWISK000000000SAMN37432886
SMYL49
GCA_036319725.1ScaffoldJAWISJ000000000SAMN37432885
SMYL22
GCA_036319705.1ScaffoldJAWISL000000000SAMN37432887
SMYL61
GCA_036319685.1ScaffoldJAWISM000000000SAMN37432888
SMYL62
GCA_036319665.1ScaffoldJAWISN000000000SAMN37432889
SMYL64
GCA_036319635.1ScaffoldJAWISP000000000SAMN37432891
SMYL73
GCA_036319625.1ScaffoldJAWISO000000000SAMN37432890
SMYL68
GCA_036319575.1ScaffoldJAWISR000000000SAMN37432893
SMYL97
GCA_036319565.1ScaffoldJAWISS000000000SAMN37432894
SMYL98
GCA_036319535.1ScaffoldJAWISU000000000SAMN37432896
SMYL3
GCA_036319525.1ScaffoldJAWISV000000000SAMN37432897
SMYL5
GCA_036319505.1ScaffoldJAWISW000000000SAMN37432898
SMYL6
GCA_036319485.1ScaffoldJAWISX000000000SAMN37432899
SMYL14
GCA_036319465.1ScaffoldJAWISY000000000SAMN37432900
SMYL16
GCA_036319445.1ScaffoldJAWITA000000000SAMN37432902
SMYL25
GCA_036319425.1ScaffoldJAWISZ000000000SAMN37432901
SMYL21
GCA_036319405.1ScaffoldJAWITC000000000SAMN37432904
SMYL29
GCA_036319385.1ScaffoldJAWITB000000000SAMN37432903
SMYL26
GCA_036319365.1ScaffoldJAWITD000000000SAMN37432905
SMYL33
GCA_036319345.1ScaffoldJAWITG000000000SAMN37432908
SMYL51
GCA_036319325.1ScaffoldJAWITE000000000SAMN37432906
SMYL34
GCA_036319295.1ScaffoldJAWITI000000000SAMN37432910
SMYL55
GCA_036319285.1ScaffoldJAWITJ000000000SAMN37432911
SMYL58
GCA_036319265.1ScaffoldJAWITL000000000SAMN37432913
SMYL69
GCA_036319245.1ScaffoldJAWITM000000000SAMN37432914
SMYL70
GCA_036319225.1ScaffoldJAWITN000000000SAMN37432915
SMYL74
GCA_036319205.1ScaffoldJAWITO000000000SAMN37432916
SMYL75
GCA_036319185.1ScaffoldJAWITP000000000SAMN37432917
SMYL79
GCA_036319165.1ScaffoldJAWITR000000000SAMN37432919
SMYL84
GCA_036319145.1ScaffoldJAWITQ000000000SAMN37432918
SMYL80
GCA_036319125.1ScaffoldJAWITT000000000SAMN37432921
SMYL87
GCA_036319105.1ScaffoldJAWITV000000000SAMN37432923
SMYL90
GCA_036319085.1ScaffoldJAWITU000000000SAMN37432922
SMYL88
GCA_036319065.1ScaffoldJAWITW000000000SAMN37432924
SMYL91
GCA_036319045.1ScaffoldJAWITX000000000SAMN37432925
SMYL92
GCA_036319025.1ScaffoldJAWITY000000000SAMN37432926
SMYL94
GCA_036319005.1ScaffoldJAWITZ000000000SAMN37432927
SMYL95
GCA_036318975.1ScaffoldJAWIUC000000000SAMN37432930
SMYL104
GCA_036318965.1ScaffoldJAWIUB000000000SAMN37432929
SMYL103
GCA_036318945.1ScaffoldJAWIUD000000000SAMN37432931
SMYL109
GCA_036318925.1ScaffoldJAWIUE000000000SAMN37432932
SMYL111
GCA_036318905.1ScaffoldJAWIUF000000000SAMN37432933
SMYL113
GCA_036319585.1ScaffoldJAWIST000000000SAMN37432895
SMYL2
GCA_036319845.1ScaffoldJAWISE000000000SAMN37432880
SMYL99
GCA_036322125.1ScaffoldJAWITF000000000SAMN37432907
SMYL40
GCA_036322105.1ScaffoldJAWITH000000000SAMN37432909
SMYL52
GCA_036322085.1ScaffoldJAWITK000000000SAMN37432912
SMYL59
GCA_036322065.1ScaffoldJAWITS000000000SAMN37432920
SMYL85
GCA_036322025.1ScaffoldJAWIUA000000000SAMN37432928
SMYL101
GCA_036318725.1ScaffoldJAWIUK000000000SAMN37432938
SMYL60
GCA_036318885.1ScaffoldJAWIUG000000000SAMN37432934
SMYL13
GCA_036318865.1ScaffoldJAWIUH000000000SAMN37432935
SMYL23
GCA_036318845.1ScaffoldJAWIUI000000000SAMN37432936
SMYL37
GCA_036318825.1ScaffoldJAWIUJ000000000SAMN37432937
SMYL38
GCA_036318805.1ScaffoldJAWIUL000000000SAMN37432939
SMYL54
GCA_036318785.1ScaffoldJAWIUM000000000SAMN37432940
SMYL83
GCA_036318765.1ScaffoldJAWIUO000000000SAMN37432942
SMYL107
GCA_036318735.1ScaffoldJAWIUN000000000SAMN37432941
SMYL96
GCA_036318705.1ScaffoldJAWIUR000000000SAMN37432945
SMYL15
GCA_036318685.1ScaffoldJAWIUS000000000SAMN37432946
SMYL27
GCA_036318665.1ScaffoldJAWIUQ000000000SAMN37432944
SMYL12
GCA_036318625.1ScaffoldJAWIUT000000000SAMN37432947
SMYL44
GCA_036318635.1ScaffoldJAWIUU000000000SAMN37432948
SMYL56
GCA_036318605.1ScaffoldJAWIUW000000000SAMN37432950
SMYL63
GCA_036318585.1ScaffoldJAWIUV000000000SAMN37432949
SMYL57
GCA_036318565.1ScaffoldJAWIUY000000000SAMN37432952
SMYL71
GCA_036318535.1ScaffoldJAWIUZ000000000SAMN37432953
SMYL78
GCA_036318525.1ScaffoldJAWIUX000000000SAMN37432951
SMYL67
GCA_036318505.1ScaffoldJAWIVA000000000SAMN37432954
SMYL93
GCA_036318445.1ScaffoldJAWIVB000000000SAMN37432955
SMYL102
GCA_036322005.1ScaffoldJAWIUP000000000SAMN37432943
SMYL10
GCA_036320005.1ScaffoldJAWIRS000000000SAMN37432868
SMYL11
GCA_036320045.1ScaffoldJAWIRT000000000SAMN37432869
SMYL20
GCA_036319925.1ScaffoldJAWIRZ000000000SAMN37432875
SMYL28
GCA_036322185.1ScaffoldJAWIRV000000000SAMN37432871
SMYL36
GCA_036319965.1ScaffoldJAWIRX000000000SAMN37432873
SMYL41
GCA_036322205.1ScaffoldJAWIRQ000000000SAMN37432866
SMYL7
GCA_036320065.1ScaffoldJAWIRR000000000SAMN37432867
SMYL8
GCA_036319905.1ScaffoldJAWIRY000000000SAMN37432874
SMYL82
GCA_036320025.1ScaffoldJAWIRU000000000SAMN37432870
SMYL86
GCA_036319985.1ScaffoldJAWIRW000000000SAMN37432872
SMYL89
GCA_036319945.1ScaffoldJAWISA000000000SAMN37432876
SMYL42
GCA_036319885.1ScaffoldJAWISB000000000SAMN37432877
SMYL100
GCA_036319865.1ScaffoldJAWISD000000000SAMN37432879
SMYL112
GCA_036322165.1ScaffoldJAWISC000000000SAMN37432878
SMYL105

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    Stenotrophomonas sp.
    Use clinical bacterial culture to understand the composition of species, identity, prevalence, resistance, pathogenicity and in Stenotrophomonas maltophilia complex. Assembly
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