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Accession: PRJNA1034496 ID: 1034496

Multiclonal plasmodium falciparum dynamics after extended arthemether-lumefantrine treatment

To explore multiclonal Plasmodium falciparum infection dynamics over the course of artemether-lumefantrine (AL) treatment and recurrence in a high transmission setting, we used amplicon deep sequencing of three highly polymorphic markers, csp, cpp, and cpmp, to determine the MOI and to track the relative and absolute densities of individual parasite clones throughout follow-up. More...
AccessionPRJNA1034496
Data TypeRaw sequence reads
ScopeMultispecies
Grants
  • "High-resolution malaria parasite and drug dynamics in the context of antimalarial treatment and drug resistance selection" (Grant ID F31 HD109060, National Institute of Child Health & Human Development)
  • "Optimizing ACT use for African children in the setting of HIV and malnutrition" (Grant ID R01 HD068174, National Institute of Child Health & Human Development)
  • "Delineating host, parasite and pharmacologic factors impacting the treatment of malaria in children with and without HIV" (Grant ID R21 HD110110, National Institute of Child Health & Human Development)
SubmissionRegistration date: 1-Nov-2023
Yale School of Public Health
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments774
Other datasets
BioSample774
SRA Data Details
ParameterValue
Data volume, Gbases129
Data volume, Mbytes65502

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