bChrRid (ID 1036992) - BioProject

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Accession: PRJEB68288 ID: 1036992

bChrRid (black-headed gull)

Chroicocephalus ridibundus (black-headed gull)

See Genome Information for Chroicocephalus ridibundus

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This project is a component of the Darwin Tree of Life Project: Genome Data and Assemblies

This project is a component of the Vertebrate Genomes Project

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2258 additional projects are components of the Darwin Tree of Life Project: Genome Data and Assemblies.

536 additional projects are components of the Vertebrate Genomes Project.

This project collects the sequencing data and assemblies generated for Chroicocephalus ridibundus, common name black-headed gull, to facilitate genome assembly and annotation as part of the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The data under this project are made available subject to the Darwin Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).

Accession	PRJEB68288
Type	Umbrella project
Organism	Chroicocephalus ridibundus[Taxonomy ID: 1192867] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Chroicocephalus; Chroicocephalus ridibundus
Submission	Registration date: 8-Nov-2023 WELLCOME SANGER INSTITUTE

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	46930
WGS master	2
Genomic DNA	34
Transcript	46133
SRA Experiments	4
Protein Sequences	40997
Other datasets
BioSample	2
Assembly	2

SRA Data Details

Parameter	Value
Data volume, Gbases	254
Data volume, Mbytes	98054

bChrRid encompasses the following 4 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Chromosomes
Contigs
Total

2
1
3

BioProject accession	Assembly level	Organism	Title
PRJEB71951	Chromosomes	Chroicocephalus ridibundus	Chroicocephalus ridibundus (black-headed gull) genome assembly, bChrRid1 (WELLCOME SANGER INSTITUTE)
PRJEB71950	Contigs	Chroicocephalus ridibundus	Chroicocephalus ridibundus (black-headed gull) genome assembly, bChrRid1, alternate haplotype (WELLCOME SANGER INSTITUTE)
PRJNA1079295	Chromosomes	Chroicocephalus ridibundus	Chroicocephalus ridibundus RefSeq BioProject (NCBI)

Other

BioProject accession	Organism	Title
PRJEB68287	Chroicocephalus ridibundus	Chroicocephalus ridibundus (black-headed gull), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE)

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bChrRid (black-headed gull)

Chroicocephalus ridibundus (black-headed gull)

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