Seed and seedling associated bacteria (ID 1041598) - BioProject

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Accession: PRJNA1041598 ID: 1041598

Seed and seedling associated bacteria

Bacteria isolated from common bean seed and seedling to reconstruct bacterial synthetic community inoculation on seed. Genome sequencing and assembly

Bacteria isolated from common bean seed and seedling to reconstruct bacterial synthetic community inoculation on seed.

Accession	PRJNA1041598
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Arnault G et al., "Seedling microbiota engineering using bacterial synthetic community inoculation on seeds.", FEMS Microbiol Ecol, 2024 Mar 12;100(4)
Grants	"OSMOSE" (Grant ID OSMOSE-2020-2022, Région Pays de la Loire) "SUCSEED" (Grant ID ANR-20-PCPA-0009, Agence Nationale pour la Recherche (France))
Submission	Registration date: 17-Nov-2023 INRAE
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	38
SRA Experiments	38
Publications
PubMed	1
PMC	1
Other datasets
BioSample	38
Assembly	38

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

31
7
38

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_036541465.1	JAZHFU000000000	SAMN38288754	CFBP9009	Bacillus sp. CFBP9009
GCA_034045075.1	JAXCWL000000000	SAMN38288758	CFBP9014	Bacillus thuringiensis
GCA_034044795.1	JAXCWR000000000	SAMN38288750	CFBP8996	Chryseobacterium sp. CFBP8996
GCA_034045095.1	JAXCWN000000000	SAMN38288756	CFBP9011	Curtobacterium sp. CFBP9011
GCA_035284125.1	JAYKOO000000000	SAMN38288760	CFBP9020	Endobacterium cereale
GCA_034044805.1	JAXCWS000000000	SAMN38288749	CFBP8995	Enterobacter sp. CFBP8995
GCA_034044945.1	JAXCWF000000000	SAMN38288765	CFBP9031	Flavobacterium sp. CFBP9031
GCA_034045305.1	JAXCWB000000000	SAMN38288769	CFBP9029	Frigoribacterium sp. CFBP9029
GCA_034045195.1	JAXCWG000000000	SAMN38288764	CFBP9030	Frigoribacterium sp. CFBP9030
GCA_034044935.1	JAXCXB000000000	SAMN38288740	CFBP8986	Kosakonia sp. CFBP8986
GCA_034044995.1	JAXCXA000000000	SAMN38288741	CFBP8987	Leclercia sp. CFBP8987
GCA_034046055.1	JAXCXH000000000	SAMN38288733	CFBP8978	Lelliottia sp. CFBP8978
GCA_034045115.1	JAXCWM000000000	SAMN38288757	CFBP9012	Massilia sp. CFBP9012
GCA_034045165.1	JAXCWH000000000	SAMN38288763	CFBP9026	Massilia sp. CFBP9026
GCA_034045055.1	JAXCWI000000000	SAMN38288762	CFBP9023	Microbacterium sp. CFBP9023
GCA_034045255.1	JAXCWC000000000	SAMN38288768	CFBP9034	Microbacterium sp. CFBP9034
GCA_034044915.1	JAXCWZ000000000	SAMN38288742	CFBP8988	Pantoea agglomerans
GCA_034044955.1	JAXCWQ000000000	SAMN38288751	CFBP9000	Pantoea agglomerans
GCA_034044845.1	JAXCWY000000000	SAMN38288743	CFBP8989	Pantoea agglomerans
GCA_034045265.1	JAXCWE000000000	SAMN38288766	CFBP9032	Pedobacter sp. CFBP9032
GCA_034045135.1	JAXCWO000000000	SAMN38288755	CFBP9010	Priestia megaterium
GCA_035284105.1	JAYKOP000000000	SAMN38288752	CFBP9003	Pseudomonas atacamensis
GCA_034045355.1	JAXCXE000000000	SAMN38288736	CFBP8982	Pseudomonas coleopterorum
GCA_034045375.1	JAXCXI000000000	SAMN38288732	CFBP8977	Pseudomonas coleopterorum
GCA_034044755.1	JAXCWV000000000	SAMN38288746	CFBP8992	Pseudomonas fluorescens
GCA_035284145.1	JAYKOQ000000000	SAMN38288738	CFBP8984	Pseudomonas rhizosphaerae
GCA_034086165.1	JAXCXG000000000	SAMN38288734	CFBP8979	Pseudomonas syringae
GCA_034044855.1	JAXCXC000000000	SAMN38288739	CFBP8985	Pseudomonas viridiflava
GCA_034044745.1	JAXCWW000000000	SAMN38288745	CFBP8991	Pseudomonas viridiflava
GCA_034045335.1	JAXCXD000000000	SAMN38288737	CFBP8983	Pseudomonas viridiflava
GCA_034045295.1	JAXCWD000000000	SAMN38288767	CFBP9033	Rathayibacter festucae
GCA_034044735.1	JAXCWX000000000	SAMN38288744	CFBP8990	Siccibacter turicensis
GCA_034044895.1	JAXCWU000000000	SAMN38288747	CFBP8993	Sphingomonas sp. CFBP8993
GCA_034045155.1	JAXCWK000000000	SAMN38288759	CFBP9019	Sphingomonas sp. CFBP9019
GCA_034045035.1	JAXCWJ000000000	SAMN38288761	CFBP9021	Sphingomonas sp. CFBP9021
GCA_034045015.1	JAXCWP000000000	SAMN38288753	CFBP9006	Stenotrophomonas rhizophila
GCA_034046095.1	JAXCXF000000000	SAMN38288735	CFBP8980	Stenotrophomonas sp. CFBP8980
GCA_034044835.1	JAXCWT000000000	SAMN38288748	CFBP8994	Stenotrophomonas sp. CFBP8994

SRA Data Details

Parameter	Value
Data volume, Gbases	46
Data volume, Mbytes	30453

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Seed and seedling associated bacteria

Bacteria isolated from common bean seed and seedling to reconstruct bacterial synthetic community inoculation on seed. Genome sequencing and assembly

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