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Accession: PRJNA1065771 ID: 1065771

Transcriptomic analysis of gills and intestine of carp after infection with Spring viraemia of carp virus

In 2022, a strain of carp viroviremia virus was isolated from a carp sample sent for testing in Leshan City, Sichuan Province, and was named SVCV-2022

For SVCV-2022, whole genome sequencing and sequence alignment analysis showed that SVCV-2022 was closely related to Asian strains and Europe

The continental cladevirus strain is distantly related, and pathological studies have found that SVCV-2022 infection has damaged the gills and intestines of carp

Most obviously, transcriptomics analysis characterized the immune response characteristics of the gills and gut of carp after SVCV infection

AccessionPRJNA1065771
Data TypeRaw sequence reads
ScopeMultispecies
SubmissionRegistration date: 17-Jan-2024
Sichuan Agricultural University
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Other datasets
BioSample12
SRA Data Details
ParameterValue
Data volume, Gbases82
Data volume, Mbytes27100

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