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Accession: PRJNA1068121 ID: 1068121

Equus caballus (Domesticated horse) genome, mEquCab1

See Genome Information for Equus caballus
The domesticated horse (Equus caballus) is a one-toed, hoofed mammal, and one of the most iconic species distinguished by its unique history, diverse breeds, and significant role in human society. This sample (mEquCab1) is from a male Arabian horse bred at Al Shaqab Equestrian Center, in Qatar. Samples were also obtained from the parents (mother mEquCab3 and father mEquCab2). These samples were provided by Farooq Omar Al-Ajli (Katara Biodiversity Genomes Program), to create trio-based high-quality assemblies of the maternal and paternal haplotypes for the Vertebrate Genomes Project (VGP) and Qatar Biodiversity Genomes Project (QBGP). Sequencing was done at the Vertebrate Genomes Lab (VGL) at Rockefeller University, led by Olivier Fedrigo and Erich D. More...
AccessionPRJNA1068121
TypeUmbrella project
OrganismEquus caballus[Taxonomy ID: 9796]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus caballus
SubmissionRegistration date: 23-Jan-2024
Vertebrate Genomes Project
RelevanceReference genome
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)67
WGS master2
SRA Experiments18
Publications
PubMed1
PMC1
Other datasets
BioSample3
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases820
Data volume, Tbytes0.38
This project encompasses the following 5 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
SRA or Trace
Total

2
3
5
BioProject
accession
Assembly
level
NameTitle
PRJNA1064424 ChromosomesEquus caballusEquus caballus (Domesticated horse) genome, mEquCab1, paternal haplotype (Vertebrate Genomes Project)
PRJNA1064425 ChromosomesEquus caballusEquus caballus (Domesticated horse) genome, mEquCab1, maternal haplotype (Vertebrate Genomes Project)
PRJNA1140150 SRA or TraceEquus caballus (Domesticated horse) genome, mEquCab1, sequence dataEquus caballus (Domesticated horse) genome, mEquCab1, sequence data (Vertebrate Genomes Project)
PRJNA1140151 SRA or TraceEquus caballus (Domesticated horse) genome, mEquCab2, sequence dataEquus caballus (Domesticated horse) genome, mEquCab2, sequence data (Vertebrate Genomes Project)
PRJNA1140152 SRA or TraceEquus caballus (Domesticated horse) genome, mEquCab3, sequence dataEquus caballus (Domesticated horse) genome, mEquCab3, sequence data (Vertebrate Genomes Project)

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