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Genome Information for Narcine bancroftii
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The lesser electric ray (Narcine bancroftii) is a species of numbfish in the family Narcinidae found on the western coastal fringes of the Atlantic Ocean and Caribbean Sea. It is a small slow-moving fish, living in the surf zone of sandy or muddy beaches (from Wikipedia entry). This sample of a male individual found in Apalachee Bay near Panacea, Florida, was procured by Gavin Naylor at Gulf Specimens Lab to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.
| Accession | PRJNA1073908 |
| Type | Umbrella project |
| Organism | Narcine bancroftii[Taxonomy ID: 1343680] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Torpediniformes; Narcinidae; Narcine; Narcine bancroftii |
| Submission | Registration date: 6-Feb-2024
Vertebrate Genomes Project |
| Relevance | Reference genome |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 31 |
| WGS master | 2 |
| SRA Experiments | 25 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 5 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes SRA or Trace Total |
2
2
4
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA1063320 | Chromosomes | Narcine bancroftii | Narcine bancroftii (lesser electric ray) genome, sNarBan1, haplotype 1 (Vertebrate Genomes Project) | | PRJNA1063321 | Chromosomes | Narcine bancroftii | Narcine bancroftii (lesser electric ray) genome, sNarBan1, haplotype 2 (Vertebrate Genomes Project) | | PRJNA1123834 | SRA or Trace | Narcine bancroftii (lesser electric ray) genome, sNarBan1, sequence data | Narcine bancroftii (lesser electric ray) genome, sNarBan1, sequence data (Vertebrate Genomes Project) | | PRJNA1115118 | SRA or Trace | Narcine bancroftii (lesser electric ray) transcriptome, sNarBan1 | Narcine bancroftii (lesser electric ray) transcriptome, sNarBan1 (Vertebrate Genomes Project) |
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