Human gammaherpesvirus 4 (ID 1077483) - BioProject

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Accession: PRJDB14197 ID: 1077483

Human gammaherpesvirus 4 (Epstein-Barr virus)

Genome sequencing of Epstein-Barr virus in diseases including gastric cancer

We sequenced the whole-genome of Epstein-Barr virus derived from gastric cancer and several other diseases such as Hodgkin's lymphoma and lymphoepithelioma.

Accession	PRJDB14197
Data Type	Genome sequencing
Scope	Monoisolate
Organism	human gammaherpesvirus 4[Taxonomy ID: 10376] Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Gammaherpesvirinae; Lymphocryptovirus; Lymphocryptovirus humangamma4; human gammaherpesvirus 4
Submission	Registration date: 16-Feb-2024 Department of Virology, Nagoya City University Graduate School of Medical Sciences
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	90
Other datasets
BioSample	90

SRA Data Details

Parameter	Value
Data volume, Gbases	160
Data volume, Mbytes	83397

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Human gammaherpesvirus 4
Human gammaherpesvirus 4
Genome sequencing of Epstein-Barr virus in diseases including gastric cancer

BioProject
hCG2040658, partial [Homo sapiens]
hCG2040658, partial [Homo sapiens]
gi|119628399|gb|EAX07994.1||gnl|WGS |hCP1912776

Protein
Andricus curvator internal transcribed spacer 1, partial sequence; 5.8S ribosoma...
Andricus curvator internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
gi|15004640|gb|AF395161.1|

Nucleotide
Homo sapiens intraflagellar transport 52 (IFT52), transcript variant 5, mRNA
Homo sapiens intraflagellar transport 52 (IFT52), transcript variant 5, mRNA
gi|1677538135|ref|NM_001323579.2|

Nucleotide
rho GTPase-activating protein 27 isoform X3 [Homo sapiens]
rho GTPase-activating protein 27 isoform X3 [Homo sapiens]
gi|2462490872|ref|XP_054184528.1|

Protein

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