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Genome Information for Stegostoma tigrinum
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The zebra shark (Stegostoma tigrinum) is a species of carpet shark and the sole member of the family Stegostomatidae. It is found throughout the tropical Indo-Pacific, frequenting coral reefs and sandy flats (from Wikipedia entry). This sample of an animal in the Georgia Aquarium, of an animal originally from Australia, was procured by Kady Lyons and Gavin Naylor, to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis.
| Accession | PRJNA1078790 |
| Type | Umbrella project |
| Organism | Stegostoma tigrinum[Taxonomy ID: 3053191] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Stegostomatidae; Stegostoma; Stegostoma tigrinum |
| Submission | Registration date: 21-Feb-2024
Vertebrate Genomes Project |
| Relevance | Reference genome |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 59044 |
| WGS master | 2 |
| Transcript | 58105 |
| Protein Sequences | 50652 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds Total |
2
1
3
|
|