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Accession: PRJNA1088094 ID: 1088094

Mannheimia haemolytica

Identification of genetic markers of resistance to macrolide class antibiotics in Mannheimia haemolytica

See Genome Information for Mannheimia haemolytica
Mannheimia haemolytica is a major contributor to bovine respiratory disease, which causes substantial economic losses to the beef industry each year, and there is an urgent need for more rapid and accurate diagnostic tests to provide evidence for treatment decisions and support antimicrobial stewardship. More...
AccessionPRJNA1088094
Data TypeGenome sequencing
ScopeMultiisolate
OrganismMannheimia haemolytica[Taxonomy ID: 75985]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
SubmissionRegistration date: 14-Mar-2024
University of Saskatchewan
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)97
WGS master55
Genomic DNA42
Protein Sequences115610
Other datasets
BioSample98
Assembly97
Assembly details:
Assembly levelNumber of Assemblies
42
55
97
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_039615365.1ContigJBDJKG000000000
SAMN40460802
MH076
GCA_039617805.1ContigJBDJIG000000000
SAMN40460705
33815_S_19
GCA_039617815.1ContigJBDJII000000000
SAMN40460707
35142_S_40
GCA_039617795.1ContigJBDJIH000000000
SAMN40460706
34455_S_12
GCA_039617775.1ContigJBDJIK000000000
SAMN40460709
36267_S_46
GCA_039617755.1ContigJBDJIJ000000000
SAMN40460708
36267_S_17
GCA_039617735.1ContigJBDJIO000000000
SAMN40460713
37684_S_01
GCA_039617715.1ContigJBDJIL000000000
SAMN40460710
36268_S_28
GCA_039617695.1ContigJBDJIM000000000
SAMN40460711
36295_S_05
GCA_039617675.1ContigJBDJIN000000000
SAMN40460712
37495_S_36
GCA_039617655.1ContigJBDJIP000000000
SAMN40460714
37684_S_02
GCA_039617635.1ContigJBDJIQ000000000
SAMN40460716
37724_S_04
GCA_039617615.1ContigJBDJIU000000000
SAMN40460722
38241_S_11
GCA_039617595.1ContigJBDJKH000000000
SAMN40460720
37787_S_06
GCA_039617575.1ContigJBDJIR000000000
SAMN40460717
37725_S_07
GCA_039617555.1ContigJBDJIS000000000
SAMN40460718
37725_S_43
GCA_039617535.1ContigJBDJIT000000000
SAMN40460721
38241_S_03
GCA_039617515.1ContigJBDJIW000000000
SAMN40460727
38241_S_28
GCA_039617495.1ContigJBDJIV000000000
SAMN40460724
38241_S_16
GCA_039617475.1ContigJBDJIY000000000
SAMN40460729
38241_S_35
GCA_039617455.1ContigJBDJIX000000000
SAMN40460728
38241_S_34
GCA_039617435.1ContigJBDJIZ000000000
SAMN40460732
38242_S_14
GCA_039617415.1ContigJBDJJA000000000
SAMN40460733
38242_S_25
GCA_039617395.1ContigJBDJJB000000000
SAMN40460734
38242_S_27
GCA_039617375.1ContigJBDJJD000000000
SAMN40460736
38242_S_30
GCA_039617355.1ContigJBDJJC000000000
SAMN40460735
38242_S_28
GCA_039617335.1ContigJBDJJG000000000
SAMN40460741
39168_S_18
GCA_039617315.1ContigJBDJJE000000000
SAMN40460737
38242_S_38
GCA_039617295.1ContigJBDJJF000000000
SAMN40460740
39168_S_11
GCA_039617275.1ContigJBDJJH000000000
SAMN40460742
39168_S_24
GCA_039617255.1ContigJBDJJI000000000
SAMN40460743
39169_S_35
GCA_039617235.1ContigJBDJJJ000000000
SAMN40460745
39324_S_16
GCA_039617215.1ContigJBDJJL000000000
SAMN40460751
40054_S_41
GCA_039617195.1ContigJBDJJK000000000
SAMN40460748
39384_S_13
GCA_039617175.1ContigJBDJJM000000000
SAMN40460753
40349_S_02
GCA_039617155.1ContigJBDJJN000000000
SAMN40460754
40408_S_01
GCA_039617135.1ContigJBDJJQ000000000
SAMN40460759
40986_S_20
GCA_039617115.1ContigJBDJJO000000000
SAMN40460757
40986_S_10
GCA_039617095.1ContigJBDJJP000000000
SAMN40460758
40986_S_18
GCA_039617075.1ContigJBDJJS000000000
SAMN40460762
MH017
GCA_039617055.1ContigJBDJJR000000000
SAMN40460761
MH007
GCA_039617035.1ContigJBDJJT000000000
SAMN40460763
MH026
GCA_039617015.1ContigJBDJJU000000000
SAMN40460764
MH027
GCA_039616995.1ContigJBDJJV000000000
SAMN40460765
MH034
GCA_039616975.1ContigJBDJJX000000000
SAMN40460782
MH054
GCA_039616955.1ContigJBDJJW000000000
SAMN40460778
MH050
GCA_039616935.1ContigJBDJJZ000000000
SAMN40460785
MH057
GCA_039616915.1ContigJBDJKB000000000
SAMN40460791
MH064
GCA_039616895.1ContigJBDJJY000000000
SAMN40460784
MH056
GCA_039616875.1ContigJBDJKA000000000
SAMN40460790
MH063
GCA_039616855.1ContigJBDJKI000000000
SAMN40460792
MH065
GCA_039616835.1ContigJBDJKC000000000
SAMN40460798
MH072
GCA_039616805.1ContigJBDJKF000000000
SAMN40460801
MH075
GCA_039616785.1ContigJBDJKD000000000
SAMN40460799
MH073
GCA_039616765.1ContigJBDJKE000000000
SAMN40460800
MH074
GCA_038127675.1ChromosomeSAMN40460730
38241_S_36
GCA_038125865.1ChromosomeSAMN40460726
38241_S_22
GCA_038124295.1ChromosomeSAMN40460723
38241_S_12
GCA_038122465.1ChromosomeSAMN40460719
37725_S_46
GCA_038120635.1ChromosomeSAMN40460715
37724_S_03
GCA_038396645.1ChromosomeSAMN40460777
MH048
GCA_038177255.1ChromosomeSAMN40460803
MH077
GCA_038176375.1ChromosomeSAMN40460797
MH071
GCA_038175115.1ChromosomeSAMN40460796
MH070
GCA_038173535.1ChromosomeSAMN40460795
MH069
GCA_038172065.1ChromosomeSAMN40460794
MH068
GCA_038170805.1ChromosomeSAMN40460793
MH067
GCA_038298845.1ChromosomeSAMN40460780
MH052
GCA_038169365.1ChromosomeSAMN40460789
MH062
GCA_038167855.1ChromosomeSAMN40460788
MH061
GCA_038166295.1ChromosomeSAMN40460787
MH060
GCA_038164765.1ChromosomeSAMN40460786
MH059
GCA_038163225.1ChromosomeSAMN40460783
MH055
GCA_038162295.1ChromosomeSAMN40460781
MH053
GCA_038159865.1ChromosomeSAMN40460776
MH047
GCA_038158525.1ChromosomeSAMN40460779
MH051
GCA_038157095.1ChromosomeSAMN40460774
MH045
GCA_038156285.1ChromosomeSAMN40460773
MH044
GCA_038156235.1ChromosomeSAMN40460772
MH043
GCA_038156145.1ChromosomeSAMN40460771
MH042
GCA_038155755.1ChromosomeSAMN40460770
MH041
GCA_038155265.1ChromosomeSAMN40460769
MH040
GCA_038155215.1ChromosomeSAMN40460768
MH039
GCA_038154865.1ChromosomeSAMN40460767
MH038
GCA_038153155.1ChromosomeSAMN40460766
MH037
GCA_038150945.1ChromosomeSAMN40460760
40986_S_28
GCA_038149045.1ChromosomeSAMN40460756
40670_S_12
GCA_038147105.1ChromosomeSAMN40460755
40670_S_02
GCA_038145235.1ChromosomeSAMN40460752
40054_S_45
GCA_038143165.1ChromosomeSAMN40460750
40054_S_37
GCA_038141055.1ChromosomeSAMN40460749
39892_S_01
GCA_038139145.1ChromosomeSAMN40460747
39324_S_18
GCA_038137255.1ChromosomeSAMN40460746
39324_S_17
GCA_038135385.1ChromosomeSAMN40460744
39324_S_12
GCA_038133415.1ChromosomeSAMN40460739
38242_S_43
GCA_038131565.1ChromosomeSAMN40460738
38242_S_42
GCA_038129635.1ChromosomeSAMN40460731
38241_S_40

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    Mannheimia haemolytica
    Identification of genetic markers of resistance to macrolide class antibiotics in Mannheimia haemolytica
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