U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJDB17794 ID: 1092039

aquatic metagenome

Bacterial dynamics of the plastisphere microbiome exposed to sub-lethal antibiotic pollution

Here, we describe the bacterial dynamics underlying this response in surface water bacteria at the community, resistome and mobilome level using a combination of methods (Next Generation Sequencing and qPCR), sequencing targets (16S rRNA gene, pre-clinical and clinical class 1 integron cassettes and metagenomes), technologies (short and long read sequencing) and assembly approaches (non-assembled reads, genome assembly and plasmid assembly).
AccessionPRJDB17794
Data TypeMetagenome
ScopeEnvironment
Organismaquatic metagenome[Taxonomy ID: 1169740]
unclassified sequences; metagenomes; ecological metagenomes; aquatic metagenome
SubmissionRegistration date: 25-Mar-2024
Universite Claude Bernard Lyon
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments60
Other datasets
BioSample60
SRA Data Details
ParameterValue
Data volume, Gbases9
Data volume, Mbytes7043

Supplemental Content

Recent activity

  • aquatic metagenome
    aquatic metagenome
    Bacterial dynamics of the plastisphere microbiome exposed to sub-lethal antibiotic pollution
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center