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Accession: PRJNA1108278 ID: 1108278

Ascaphus truei (tailed frog) genome, aAscTru1

See Genome Information for Ascaphus truei
The tailed frog (Ascaphus truei) is one of two species of frogs in the genus Ascaphus, the only taxon in the family Ascaphidae. The tail is one of two distinctive anatomical features adapting the species to life in fast-flowing streams. The two species are the only North American frog species that reproduce by internal fertilization (from Wikipedia entry). This sample of a male individual found at the Luckiamute River in Polk County, Oregon, USA, was coordinated by Gwendolynn W. Bury (Oregon State University) and R. Bruce Bury (U.S. Geological Survey) to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). The individual was collected by Mark Leppin (Oregon State University) under Oregon Scientific Permit #114-20, and the sample was dissected by Adam Leache (University of Washington). More...
AccessionPRJNA1108278
TypeUmbrella project
OrganismAscaphus truei[Taxonomy ID: 8439]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Ascaphidae; Ascaphus; Ascaphus truei
SubmissionRegistration date: 6-May-2024
Vertebrate Genomes Project
RelevanceReference Genome
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)48
WGS master2
SRA Experiments21
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases808
Data volume, Tbytes0.37
This project encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
SRA or Trace
Total

2
1
3
BioProject
accession
Assembly
level
NameTitle
PRJNA1106995 ChromosomesAscaphus trueiAscaphus truei (tailed frog) genome, aAscTru1, haplotype 1 (Vertebrate Genomes Project)
PRJNA1106993 ChromosomesAscaphus trueiAscaphus truei (tailed frog) genome, aAscTru1, haplotype 2 (Vertebrate Genomes Project)
PRJNA1147609 SRA or TraceAscaphus truei (tailed frog) genome, aAscTru1, sequence dataAscaphus truei (tailed frog) genome, aAscTru1, sequence data (Vertebrate Genomes Project)

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