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Accession: PRJEB75734 ID: 1112712

Streptococcus pneumoniae from children with invasive pneumococcal disease from Utah

Streptococcus pneumoniae genomes isolated from disease cases at the Primary Children's Hospital at the University of Utah

See Genome Information for Streptococcus pneumoniae
These genomes were sequenced at the University of Utah (Salt Lake City, Utah, USA) in 2016 from Streptococcus pneumoniae isolates collected from children with invasive pneumococcal disease at Primary Children's hospital at the University of Utah (Salt Lake City, Utah, USA).
AccessionPRJEB75734
Data TypeGenome sequencing
ScopeMonoisolate
OrganismStreptococcus pneumoniae[Taxonomy ID: 1313]
Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae
SubmissionRegistration date: 17-May-2024
WELLCOME SANGER INSTITUTE
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)664
WGS master21
Protein Sequences43193
Other datasets
BioSample21
Assembly21
Assembly details:
Assembly levelNumber of Assemblies
17
4
21
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_964056835.1ScaffoldCAXKTW000000000SAMEA115616822
24819
GCA_964056855.1ScaffoldCAXKUG000000000SAMEA115616818
9067
GCA_964056935.1ScaffoldCAXKUE000000000SAMEA115616820
18769
GCA_964056895.1ScaffoldCAXKUB000000000SAMEA115616819
9426
GCA_964056765.1ContigCAXKUA000000000SAMEA115616809
26620
GCA_964056885.1ContigCAXKUF000000000SAMEA115616808
26115
GCA_964056785.1ScaffoldCAXKTR000000000SAMEA115616825
6859
GCA_964056825.1ScaffoldCAXKUC000000000SAMEA115616821
19683
GCA_964056945.1ScaffoldCAXKTU000000000SAMEA115616812
26625
GCA_964056845.1ScaffoldCAXKUK000000000SAMEA115616816
28258
GCA_964056745.1ScaffoldCAXKUJ000000000SAMEA115616817
29123
GCA_964056795.1ScaffoldCAXKTS000000000SAMEA115616823
25430
GCA_964056915.1ContigCAXKTZ000000000SAMEA115616824
25602
GCA_964056815.1ContigCAXKTX000000000SAMEA115616815
26771
GCA_964056755.1ScaffoldCAXKUH000000000SAMEA115616814
28169
GCA_964056875.1ScaffoldCAXKUL000000000SAMEA115616826
30203
GCA_964056775.1ScaffoldCAXKTV000000000SAMEA115616813
24060
GCA_964056905.1ScaffoldCAXKTT000000000SAMEA115616807
25497
GCA_964056805.1ScaffoldCAXKUI000000000SAMEA115616810
26633
GCA_964056925.1ScaffoldCAXKTY000000000SAMEA115616811
26087
GCA_964056865.1ScaffoldCAXKUD000000000SAMEA115616827
30488

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