Hospital environment and outbreak investigation (ID 1119905) - BioProject

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Accession: PRJEB76256 ID: 1119905

Hospital environment and outbreak investigation

Hospital environment and outbreak investigation of multidrug-resistant gram-negative bacteria

Here we investigate the role of the hospital environment, in particular toilets and drainage system, in outbreaks of multidrug-resistant gram-negative bacteria using both short-read and long-read sequencing technologies.

Accession	PRJEB76256
Data Type	Genome sequencing
Scope	Monoisolate
Submission	Registration date: 4-Jun-2024 University Hospital of North Norway

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	45
WGS master	8
SRA Experiments	38
Other datasets
BioSample	30
Assembly	8

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

8
8

Assembly	WGS	BioSample	Taxonomy
GCA_964188485.1	CAXLPN000000000	SAMEA115670482	Klebsiella michiganensis
GCA_964188495.1	CAXLPO000000000	SAMEA115670463	Klebsiella michiganensis
GCA_964188435.1	CAXLPI000000000	SAMEA115670469	Klebsiella michiganensis
GCA_964188455.1	CAXLPK000000000	SAMEA115670490	Klebsiella michiganensis
GCA_964188505.1	CAXLPP000000000	SAMEA115670462	Klebsiella michiganensis
GCA_964188445.1	CAXLPJ000000000	SAMEA115670471	Klebsiella oxytoca
GCA_964188465.1	CAXLPL000000000	SAMEA115670470	Klebsiella oxytoca
GCA_964188475.1	CAXLPM000000000	SAMEA115670477	Klebsiella oxytoca

SRA Data Details

Parameter	Value
Data volume, Gbases	24
Data volume, Mbytes	9010

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Genome
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Nucleotide
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SRA
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