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Accession: PRJNA1125858 ID: 1125858

Fecal carriage of ESBL-producing Escherichia coli in rural children in the Somali region, Ethiopia

Community-based study in the rural Somali region of Ethiopia examining the fecal carriage of Extended-Spectrum Beta-Lactamase (ESBL)-producing Escherichia coli in children aged 2-5 years. More...
AccessionPRJNA1125858
Data TypeGenome sequencing
ScopeMultispecies
SubmissionRegistration date: 19-Jun-2024
Swiss Tropical and Public Health Institute
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)48
Other datasets
BioSample48
Assembly48
Assembly details:
Assembly levelNumber of Assemblies
48
48
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_040813645.1ContigJBFOCF000000000SAMN41910765
AgroPast_Hig_1
GCA_040813575.1ContigJBFOCB000000000SAMN41910769
Past_Mal_1
GCA_040813545.1ContigJBFOCA000000000SAMN41910770
Past_Har_2
GCA_040813565.1ContigJBFOCD000000000SAMN41910767
AgroPast_Hig_2
GCA_040813535.1ContigJBFOCE000000000SAMN41910766
Past_Har_1
GCA_040813555.1ContigJBFOCC000000000SAMN41910768
AgroPast_Bur_1
GCA_040813475.1ContigJBFOBW000000000SAMN41910774
Past_Mal_5
GCA_040813455.1ContigJBFOBV000000000SAMN41910775
Past_Tod_1
GCA_040813465.1ContigJBFOBZ000000000SAMN41910771
Past_Mal_2
GCA_040813445.1ContigJBFOBY000000000SAMN41910772
Past_Mal_3
GCA_040813435.1ContigJBFOBX000000000SAMN41910773
Past_Mal_4
GCA_040813415.1ContigJBFOBU000000000SAMN41910776
Past_Tod_2
GCA_040813335.1ContigJBFOBQ000000000SAMN41910780
Past_Mal_6
GCA_040813355.1ContigJBFOBS000000000SAMN41910778
Past_Dab_2
GCA_040813385.1ContigJBFOBT000000000SAMN41910777
Past_Dab_1
GCA_040813345.1ContigJBFOBR000000000SAMN41910779
Past_Dab_3
GCA_040813315.1ContigJBFOBP000000000SAMN41910781
Past_Tod_3
GCA_040813285.1ContigJBFOBO000000000SAMN41910782
Past_Mal_7
GCA_040813265.1ContigJBFOBN000000000SAMN41910783
Past_Mal_8
GCA_040813255.1ContigJBFOBM000000000SAMN41910784
AgroPast_Bur_2
GCA_040813235.1ContigJBFOBL000000000SAMN41910785
AgroPast_Hig_3
GCA_040813205.1ContigJBFOBJ000000000SAMN41910787
Past_Har_3
GCA_040813195.1ContigJBFOBI000000000SAMN41910788
Past_Dab_4
GCA_040813165.1ContigJBFOBK000000000SAMN41910786
Past_Tod_4
GCA_040813135.1ContigJBFOBG000000000SAMN41910790
Past_Mal_9
GCA_040813155.1ContigJBFOBH000000000SAMN41910789
Past_Tod_5
GCA_040813075.1ContigJBFOBC000000000SAMN41910794
Past_Tod_7
GCA_040813095.1ContigJBFOBF000000000SAMN41910791
Past_Tod_6
GCA_040813085.1ContigJBFOBD000000000SAMN41910793
Past_Dab_5
GCA_040813055.1ContigJBFOBE000000000SAMN41910792
AgroPast_Hig_4
GCA_040813015.1ContigJBFOBB000000000SAMN41910795
Past_Dab_6
GCA_040813035.1ContigJBFOBA000000000SAMN41910796
Past_Dab_7
GCA_040812995.1ContigJBFOAZ000000000SAMN41910797
Past_Mal_10
GCA_040812925.1ContigJBFOAY000000000SAMN41910798
Past_Tod_8
GCA_040812915.1ContigJBFOAX000000000SAMN41910799
Past_Har_4
GCA_040812855.1ContigJBFOAW000000000SAMN41910800
Past_Mal_11
GCA_040812835.1ContigJBFOAV000000000SAMN41910801
Past_Tod_9
GCA_040812795.1ContigJBFOAU000000000SAMN41910802
Past_Har_5
GCA_040812775.1ContigJBFOAP000000000SAMN41910807
Past_Mal_15
GCA_040812715.1ContigJBFOAS000000000SAMN41910804
Past_Mal_13
GCA_040812695.1ContigJBFOAQ000000000SAMN41910806
AgroPast_Hig_5
GCA_040812635.1ContigJBFOAR000000000SAMN41910805
Past_Mal_14
GCA_040812675.1ContigJBFOAT000000000SAMN41910803
Past_Mal_12
GCA_040812575.1ContigJBFOAO000000000SAMN41910808
Past_Har_6
GCA_040812555.1ContigJBFOAN000000000SAMN41910809
Past_Har_7
GCA_040812535.1ContigJBFOAL000000000SAMN41910811
Past_Dab_8
GCA_040812495.1ContigJBFOAK000000000SAMN41910812
Past_Tod_10
GCA_040812475.1ContigJBFOAM000000000SAMN41910810
Past_Mal_16

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