ID 1133775 - BioProject

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Accession: PRJNA1133775 ID: 1133775

Genome sequencing of five SAR116 Alphaproteobacteria isolates

Five new SAR116 bacterioplankton isolates were genome sequenced to provide a more comprehensive understanding of the clade and to support physiological experimentation with the isolates in the lab.

Accession	PRJNA1133775
Data Type	Genome sequencing
Scope	Multispecies
Submission	Registration date: 9-Jul-2024 University of Southern California
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5
WGS master	1
Genomic DNA	4
SRA Experiments	9
Protein Sequences	9913
Other datasets
BioSample	5
Assembly	5

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

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Total

4
1
5

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_041228355.1		1	SAMN42386550	LSUCC0226	Alphaproteobacteria bacterium LSUCC0226
GCA_041228345.1		1	SAMN42386551	LSUCC0396	Alphaproteobacteria bacterium LSUCC0396
GCA_041228335.1		1	SAMN42386552	LSUCC0684	Alphaproteobacteria bacterium LSUCC0684
GCA_040839025.1	JBFPJN000000000		SAMN42386553	LSUCC0719	Alphaproteobacteria bacterium LSUCC0719
GCA_041228325.1		1	SAMN42386554	LSUCC0744	Alphaproteobacteria bacterium LSUCC0744

SRA Data Details

Parameter	Value
Data volume, Gbases	10
Data volume, Mbytes	4591

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Genomic DNA
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RecName: Full=Golgin subfamily A member 6C
RecName: Full=Golgin subfamily A member 6C
gi|187471137|sp|A6NDK9.1|GOG6C_HUMA

Protein
pre-mRNA-splicing factor 18 [Rattus norvegicus]
pre-mRNA-splicing factor 18 [Rattus norvegicus]
gi|19924053|ref|NP_612532.1|

Protein
Receptors, Purinergic P2X5
Receptors, Purinergic P2X5
A purinergic P2X neurotransmitter receptor found at high levels in the BRAIN and IMMUNE SYSTEM.<br/>Year introduced: 2011

MeSH
Gpt2 glutamic--pyruvic transaminase 2 [Rattus norvegicus]
Gpt2 glutamic--pyruvic transaminase 2 [Rattus norvegicus]
Gene ID:307759

Gene

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Genome sequencing of five SAR116 Alphaproteobacteria isolates

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