U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA1143568 ID: 1143568

Healthy chicken microbiome

In this study, we are targeting to investigate the microbiome from healthy chicken.
AccessionPRJNA1143568
Data TypeGenome sequencing
ScopeMultispecies
SubmissionRegistration date: 2-Aug-2024
McGill University
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)150
SRA Experiments170
Other datasets
BioSample156
Assembly150
Assembly details:
Assembly levelNumber of Assemblies
150
150
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_041359515.1ContigJBGJLW000000000SAMN43103439
4-AB0-25
GCA_041359795.1ContigJBGJMI000000000SAMN43103427
J-D0-47
GCA_041477285.1ContigJBGNWU000000000SAMN43013289
Ae14
GCA_041359315.1ContigJBGJLK000000000SAMN43103451
5-AB21-49
GCA_041359255.1ContigJBGJLJ000000000SAMN43103452
5-AB21-65
GCA_041359675.1ContigJBGJMA000000000SAMN43103435
S1-B1-39
GCA_041359215.1ContigJBGJLE000000000SAMN43103457
J-D0-37
GCA_041361355.1ContigJBGJOY000000000SAMN43067032
J-D0-20
GCA_041359595.1ContigJBGJLV000000000SAMN43103440
4-AB0-37
GCA_041359495.1ContigJBGJLT000000000SAMN43103442
4-AB0-52
GCA_041359425.1ContigJBGJLR000000000SAMN43103444
4-AB0-8
GCA_041361235.1ContigJBGJOV000000000SAMN43103362
S3-AB0-31
GCA_041361265.1ContigJBGJOW000000000SAMN43103361
S3-AB0-26
GCA_041361215.1ContigJBGJOT000000000SAMN43103364
S3-AB3-43
GCA_041361225.1ContigJBGJOU000000000SAMN43103363
S3-AB0-9
GCA_041361175.1ContigJBGJOR000000000SAMN43103366
S3-AB7-39
GCA_041361185.1ContigJBGJOP000000000SAMN43103368
S3-AN0-33
GCA_041361145.1ContigJBGJOS000000000SAMN43103365
S3-AB7-32
GCA_041361135.1ContigJBGJOQ000000000SAMN43103367
S3-AN0-15
GCA_041361115.1ContigJBGJOO000000000SAMN43103369
S4-AB0-12
GCA_041361055.1ContigJBGJOM000000000SAMN43103371
S4-AB0-3
GCA_041361065.1ContigJBGJON000000000SAMN43103370
S4-AB0-21
GCA_041361035.1ContigJBGJOK000000000SAMN43103373
S4-AB0-47
GCA_041361045.1ContigJBGJOL000000000SAMN43103372
S4-AB0-35
GCA_041361015.1ContigJBGJOJ000000000SAMN43103374
S4-AB0-5
GCA_041360985.1ContigJBGJOI000000000SAMN43103375
S4-AB0-67
GCA_041360975.1ContigJBGJOH000000000SAMN43103376
S4-AB0-87
GCA_041360935.1ContigJBGJOG000000000SAMN43103377
S4-AB0-88
GCA_041360915.1ContigJBGJOE000000000SAMN43103379
S4-AB3-11
GCA_041360925.1ContigJBGJOF000000000SAMN43103378
S4-AB14-21
GCA_041360885.1ContigJBGJOC000000000SAMN43103381
S4-AB3-29
GCA_041360835.1ContigJBGJOA000000000SAMN43103383
S6-AB0-16
GCA_041360845.1ContigJBGJOD000000000SAMN43103380
S4-AB3-21
GCA_041360855.1ContigJBGJOB000000000SAMN43103382
S5-AB21-52
GCA_041360815.1ContigJBGJNZ000000000SAMN43103384
S6-AB0-18
GCA_041359775.1ContigJBGJMJ000000000SAMN43103426
J-D0-40
GCA_041359735.1ContigJBGJMG000000000SAMN43103429
J-D0-52
GCA_041360035.1ContigJBGJMT000000000SAMN43103416
5-AN28-26
GCA_041360015.1ContigJBGJMU000000000SAMN43103415
5-AN0-37
GCA_041359995.1ContigJBGJMS000000000SAMN43103417
5-AN3-24
GCA_041359895.1ContigJBGJMR000000000SAMN43103418
6-AB0-2
GCA_041359975.1ContigJBGJMO000000000SAMN43103421
6-AB3-21
GCA_041359935.1ContigJBGJMQ000000000SAMN43103419
6-AB0-67
GCA_041359925.1ContigJBGJMP000000000SAMN43103420
6-AB3-16
GCA_041359905.1ContigJBGJMN000000000SAMN43103422
6-AB3-22
GCA_041359875.1ContigJBGJMM000000000SAMN43103423
6-AB3-29
GCA_041359855.1ContigJBGJMK000000000SAMN43103425
J-D0-31
GCA_041360495.1ContigJBGJNR000000000SAMN43103392
S6-AB3-79
GCA_041360415.1ContigJBGJNO000000000SAMN43103395
3-AB0-17
GCA_041360425.1ContigJBGJNP000000000SAMN43103394
2-B2-16
GCA_041360435.1ContigJBGJNN000000000SAMN43103396
3-AB7-25
GCA_041360465.1ContigJBGJNQ000000000SAMN43103393
2-AN2-45
GCA_041359815.1ContigJBGJMH000000000SAMN43103428
J-D0-51
GCA_041360675.1ContigJBGJNY000000000SAMN43103385
S6-AB0-6
GCA_041360595.1ContigJBGJNX000000000SAMN43103386
S6-AB3-1
GCA_041360605.1ContigJBGJNV000000000SAMN43103388
S6-AB3-41
GCA_041360525.1ContigJBGJNU000000000SAMN43103389
S6-AB3-5
GCA_041360575.1ContigJBGJNW000000000SAMN43103387
S6-AB3-13
GCA_041360545.1ContigJBGJNT000000000SAMN43103390
S6-AB3-59
GCA_041360515.1ContigJBGJNS000000000SAMN43103391
S6-AB3-67
GCA_041360395.1ContigJBGJNL000000000SAMN43103398
3-AB7-52
GCA_041360375.1ContigJBGJNM000000000SAMN43103397
3-AB7-29
GCA_041360355.1ContigJBGJNK000000000SAMN43103399
3-AN3-32
GCA_041360285.1ContigJBGJNH000000000SAMN43103402
4-AB3-26
GCA_041360295.1ContigJBGJNJ000000000SAMN43103400
4-AB14-3
GCA_041360275.1ContigJBGJNF000000000SAMN43103404
4-AB3-54
GCA_041360255.1ContigJBGJNG000000000SAMN43103403
4-AB3-40
GCA_041360305.1ContigJBGJNI000000000SAMN43103401
4-AB14-35
GCA_041360235.1ContigJBGJNE000000000SAMN43103405
5-AB21-42
GCA_041360155.1ContigJBGJNB000000000SAMN43103408
5-AB28-19
GCA_041360185.1ContigJBGJND000000000SAMN43103406
5-AB21-47
GCA_041360165.1ContigJBGJNC000000000SAMN43103407
5-AB21-60
GCA_041360055.1ContigJBGJMX000000000SAMN43103412
5-AB7-32
GCA_041360135.1ContigJBGJMZ000000000SAMN43103410
5-AB3-55
GCA_041360105.1ContigJBGJMV000000000SAMN43103414
5-AN0-30
GCA_041360085.1ContigJBGJMW000000000SAMN43103413
5-AB7-6
GCA_041360065.1ContigJBGJMY000000000SAMN43103411
5-AB7-15
GCA_041358315.1ContigJBGJJL000000000SAMN43082550
S3-AB7-61
GCA_041358435.1ContigJBGJJR000000000SAMN43082544
S2-B2-17
GCA_041358415.1ContigJBGJJS000000000SAMN43082543
S2-AN2-7
GCA_041358395.1ContigJBGJJQ000000000SAMN43082545
S2-B2-18
GCA_041358355.1ContigJBGJJP000000000SAMN43082546
S2-B2-22
GCA_041358675.1ContigJBGJKD000000000SAMN43082532
S2-AN1-29
GCA_041358655.1ContigJBGJKE000000000SAMN43082531
S2-AN1-26
GCA_041359535.1ContigJBGJLU000000000SAMN43103441
4-AB0-4
GCA_041358475.1ContigJBGJJT000000000SAMN43082542
S2-AN2-6
GCA_041358295.1ContigJBGJJM000000000SAMN43082549
S3-AB7-43
GCA_041358275.1ContigJBGJJK000000000SAMN43082551
S3-AN0-1
GCA_041358255.1ContigJBGJJI000000000SAMN43082553
S3-AN0-28
GCA_041358235.1ContigJBGJJH000000000SAMN43082554
S3-AN0-39
GCA_041358215.1ContigJBGJJG000000000SAMN43082555
S3-AN0-9
GCA_041358195.1ContigJBGJJJ000000000SAMN43082552
S3-AN0-22
GCA_041359395.1ContigJBGJLO000000000SAMN43103447
4-AB21-48
GCA_041359355.1ContigJBGJLL000000000SAMN43103450
5-AB0-5
GCA_041359335.1ContigJBGJLM000000000SAMN43103449
5-AB0-43
GCA_041359135.1ContigJBGJLC000000000SAMN43103459
J-D0-50
GCA_041359115.1ContigJBGJLB000000000SAMN43103460
J-D0-10
GCA_041359295.1ContigJBGJLH000000000SAMN43103454
6-AB0-3
GCA_041359275.1ContigJBGJLG000000000SAMN43103455
J-D0-08
GCA_041358975.1ContigJBGJKT000000000SAMN43082516
S1-B1-16
GCA_041358955.1ContigJBGJKR000000000SAMN43082518
S1-B1-59
GCA_041358935.1ContigJBGJKS000000000SAMN43082517
S1-B1-24
GCA_041358915.1ContigJBGJKQ000000000SAMN43082519
S1-B1-63
GCA_041358895.1ContigJBGJKO000000000SAMN43082521
S1-B1-78
GCA_041358875.1ContigJBGJKP000000000SAMN43082520
S1-B1-65
GCA_041358855.1ContigJBGJKN000000000SAMN43082522
S1-B5-AE6
GCA_041358835.1ContigJBGJKM000000000SAMN43082523
S1-B5-AN11
GCA_041358805.1ContigJBGJKI000000000SAMN43082527
S1-B5-AN36
GCA_041358795.1ContigJBGJKJ000000000SAMN43082526
S1-B5-AN31
GCA_041358775.1ContigJBGJKK000000000SAMN43082525
S1-B5-AN3
GCA_041358755.1ContigJBGJKL000000000SAMN43082524
S1-B5-AN15
GCA_041358735.1ContigJBGJKF000000000SAMN43082530
S2-AN1-18
GCA_041358715.1ContigJBGJKH000000000SAMN43082528
S1-B5-AN40
GCA_041359035.1ContigJBGJKV000000000SAMN43103466
J15
GCA_041358615.1ContigJBGJKB000000000SAMN43082534
S2-AN2-16
GCA_041358595.1ContigJBGJKA000000000SAMN43082535
S2-AN2-19
GCA_041358575.1ContigJBGJJY000000000SAMN43082537
S2-AN2-33
GCA_041358555.1ContigJBGJJW000000000SAMN43082539
S2-AN2-38
GCA_041358535.1ContigJBGJJZ000000000SAMN43082536
S2-AN2-32
GCA_041358515.1ContigJBGJJX000000000SAMN43082538
S2-AN2-34
GCA_041358495.1ContigJBGJJV000000000SAMN43082540
S2-AN2-39
GCA_041358695.1ContigJBGJKG000000000SAMN43082529
S2-AN1-1
GCA_041358455.1ContigJBGJJU000000000SAMN43082541
S2-AN2-40
GCA_041358635.1ContigJBGJKC000000000SAMN43082533
S2-AN1-6
GCA_041358375.1ContigJBGJJN000000000SAMN43082548
S3-AB0-47
GCA_041358335.1ContigJBGJJO000000000SAMN43082547
S3-AB0-44
GCA_041360215.1ContigJBGJNA000000000SAMN43103409
5-AB3-26
GCA_041359755.1ContigJBGJMF000000000SAMN43103430
J-D0-61
GCA_041361285.1ContigJBGJOX000000000SAMN43067033
J-D0-44
GCA_041359155.1ContigJBGJLA000000000SAMN43103461
S1-B1-77
GCA_041359415.1ContigJBGJLP000000000SAMN43103446
4-AB21-27
GCA_041359195.1ContigJBGJLF000000000SAMN43103456
J-D0-23
GCA_041359015.1ContigJBGJKW000000000SAMN43103465
B1-07
GCA_041359075.1ContigJBGJKX000000000SAMN43103464
B1-05
GCA_041359095.1ContigJBGJKY000000000SAMN43103463
S2-B3-47
GCA_041359375.1ContigJBGJLN000000000SAMN43103448
4-AB21-9
GCA_041359455.1ContigJBGJLQ000000000SAMN43103445
4-AB0-81
GCA_041359055.1ContigJBGJKZ000000000SAMN43103462
S2-B3-18
GCA_041358995.1ContigJBGJKU000000000SAMN43103467
J35
GCA_041359235.1ContigJBGJLI000000000SAMN43103453
5-AB3-28
GCA_041359695.1ContigJBGJMD000000000SAMN43103432
S1-B1-10
GCA_041359655.1ContigJBGJMC000000000SAMN43103433
S1-B1-11
GCA_041359615.1ContigJBGJLZ000000000SAMN43103436
S1-B1-40
GCA_041359165.1ContigJBGJLD000000000SAMN43103458
J-D0-45
GCA_041359715.1ContigJBGJME000000000SAMN43103431
S1-B1-08
GCA_041359575.1ContigJBGJLY000000000SAMN43103437
S1-B1-56
GCA_041359835.1ContigJBGJML000000000SAMN43103424
J-D0-02
GCA_041359545.1ContigJBGJLX000000000SAMN43103438
2-AB0-20
GCA_041359475.1ContigJBGJLS000000000SAMN43103443
4-AB0-61
GCA_041359635.1ContigJBGJMB000000000SAMN43103434
J-D0-22
SRA Data Details
ParameterValue
Data volume, Gbases125
Data volume, Mbytes54313

Supplemental Content

Recent activity

    Your browsing activity is empty.

    Activity recording is turned off.

    Turn recording back on

    See more...
    Support Center