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Genome Information for Zea mays
The 7d-mesocotyls of wild type B73 and its ZmWRKY53-KO counterparts were treated with or without S. reilianum for RNA sequencing.The differentially expressed genes (DEGs) were identified based on the criteria of fold-change > 2 and P < 0.05. Under normal conditions, we found 1,025 downregulated and 599 upregulated differentially expressed genes (DEGs) in the ZmWRKY53-KO plant compared to its wild-type B73 counterpart. Under S. reilianum-infected conditions, 1,041 downregulated and 1,268 upregulated DEGs were identified in the ZmWRKY53-KO plant.
Overall design: To invesigate the ZmWRKY53 mediated resistance to maize head smut disease, we performed RNA-Seq between ZmWRKY-KO and B73.
| Accession | PRJNA1166909; GEO: GSE278385 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Zea mays[Taxonomy ID: 4577] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea; Zea mays |
| Submission | Registration date: 29-Sep-2024
China Agricultural University |
| Relevance | Agricultural |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 12 |
| Other datasets |
| BioSample | 12 |
| GEO DataSets | 1 |