ID 1180595 - BioProject

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Accession: PRJNA1180595 ID: 1180595

Whole genome sequencing of Salmonella sp as part of PEHRL (PHM-FSS) surveillance activities in Queensland Australia.

See Genome Information for Salmonella enterica

This dataset is being generated to investigate the genomic epidemiology and AMR in Salmonella species in Queensland, Australia.

Accession	PRJNA1180595
Type	Umbrella project
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Grants	"Australian Pathogen Genomics (AusPathoGen) Program" (Grant ID FSPGN000049, Medical Research Futures Fund_Genomics Health Futures Mission (GHFM)Flagships - Pathogen Genomics)
Submission	Registration date: 31-Oct-2024 Pathology Queensland
Relevance	Medical

Project Data:

Parameter	Value
Data volume, Gbases	3,123
Data volume, Tbytes	1.39

This project encompasses the following 4 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Contigs
SRA or Trace
Total

1
3
4

BioProject accession	Assembly level	Name	Title
PRJNA848119	SRA or Trace	Genomic epidemiology and multilevel genome typing of Australian Salmonella enterica serovar Enteritidis	Genomic epidemiology and multilevel genome typing of Australian Salmonella enterica serovar Enteritidis (University of New South Wales,...)
PRJNA1145572	SRA or Trace	Salmonella enterica	Whole genome sequencing of Salmonella sp as part of PEHRL (PHM-FSS) surveillance activities in Queensland Australia. (Pathology Queensland)
PRJNA489746	SRA or Trace	Salmonella enterica	Salmonella enterica subsp. enterica (Institute of Clinical Pathology...)
PRJEB57403	Contigs	Whole Genome Sequencing (WGS) provides insights into locally acquired outbreak cluster from a rare clade of Salmonella enterica serovar Enteritidis in, Queensland, Australia	Whole Genome Sequencing (WGS) provides insights into locally acquired outbreak cluster from a rare clade of Salmonella enterica serovar Enteritidis in, Queensland, Australia (QLD Health)