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Accession: PRJNA170427 ID: 170427

BCM-HGSC Marine Mammal Genome Projects

BCM-HGSC is working with collaborators to provide reference genomes for important Marine Mammals species including the bottlenosed dolphin (Tursiops truncatus), killer whale (Orcinus orca), and walrus (Odobenus rosmarus). The goal of the project is to understand the contribution of the genome sequence to the biology of the organisms including but not limited to the study of the lineages of land mammals that returned to ocean living. The biology of the individual species will also be examined in relation to their genome sequences.
AccessionPRJNA170427
TypeUmbrella Comparative genomics project (Subtype:Comparative genomics)
PublicationsFoote AD et al., "Convergent evolution of the genomes of marine mammals.", Nat Genet, 2015 Mar;47(3):272-5
SubmissionRegistration date: 11-Jul-2012
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)62501
WGS master3
Genomic DNA1
SRA Experiments22
Protein Sequences13
Publications
PubMed4
PMC4
Other datasets
BioSample4
PopSet1
Assembly3
SRA Data Details
ParameterValue
Data volume, Gbases1,232
Data volume, Tbytes0.82
BCM-HGSC Marine Mammal Genome Projects encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds

3
BioProject
accession
Assembly
level
OrganismTitle
PRJNA167474 ScaffoldsOdobenus rosmarus divergensWhole genome assembly of Pacific Walrus using multiple sequencing platform (Marine mammals)
PRJNA167475 ScaffoldsOrcinus orcaOrcinus orca Genome sequencing and assembly (Marine mammals)
PRJNA20367 ScaffoldsTursiops truncatusTursiops truncatus Genome sequencing and assembly (Baylor College of Medicine)

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